This paper reviews classical theories of coarse-graining and gives a short introduction to representative coarse-grained atomistic models that were developed based on structure reduction, an assumption of homogenous deformation, and field representation. The applicability and limitations of these coarse-grained models are analyzed on the basis of their theoretical frameworks as well as the coarse-graining methods they employ. (C) 2011 Elsevier Ltd. All rights reserved.
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Penn State Univ, Dept Chem, University Pk, PA 16802 USAPenn State Univ, Dept Chem, University Pk, PA 16802 USA
Noid, W. G.
Szukalo, Ryan J.
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Penn State Univ, Dept Chem, University Pk, PA 16802 USA
Princeton Univ, Dept Chem, Princeton, NJ USAPenn State Univ, Dept Chem, University Pk, PA 16802 USA
Szukalo, Ryan J.
Kidder, Katherine M.
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Penn State Univ, Dept Chem, University Pk, PA 16802 USAPenn State Univ, Dept Chem, University Pk, PA 16802 USA
Kidder, Katherine M.
Lesniewski, Maria C.
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Penn State Univ, Dept Chem, University Pk, PA 16802 USAPenn State Univ, Dept Chem, University Pk, PA 16802 USA
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Univ Chicago, James Franck Inst, Dept Chem, Chicago, IL 60637 USA
Univ Chicago, Inst Biophys Dynam, Chicago, IL 60637 USAUniv Chicago, James Franck Inst, Dept Chem, Chicago, IL 60637 USA
Jin, Jaehyeok
Han, Yining
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Univ Chicago, James Franck Inst, Dept Chem, Chicago, IL 60637 USA
Univ Chicago, Inst Biophys Dynam, Chicago, IL 60637 USAUniv Chicago, James Franck Inst, Dept Chem, Chicago, IL 60637 USA
Han, Yining
Voth, Gregory A.
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Univ Chicago, James Franck Inst, Dept Chem, Chicago, IL 60637 USA
Univ Chicago, Inst Biophys Dynam, Chicago, IL 60637 USAUniv Chicago, James Franck Inst, Dept Chem, Chicago, IL 60637 USA