Comprehensive Analysis of Bacterial Community Structure and Diversity in Sichuan Dark Tea (Camellia sinensis)

被引:14
作者
Yan, Kuan [1 ,2 ]
Yan, Linfeng [3 ]
Meng, Lina [1 ,2 ]
Cai, Hongbing [3 ]
Duan, Ailing [1 ]
Wang, Lian [1 ]
Li, Quanzi [4 ,5 ]
El-Sappah, Ahmed H. [1 ,2 ,6 ]
Zhao, Xianming [1 ,2 ]
Abbas, Manzar [1 ,2 ]
机构
[1] Yibin Univ, Fac Agr Forestry & Food Engn, Yibin, Peoples R China
[2] Key Lab Sichuan Prov Refining Sichuan Tea, Yibin, Peoples R China
[3] Sichuan Prov Tea Ind Grp Co Ltd, Yibin, Peoples R China
[4] Chinese Acad Forestry, State Key Lab Tree Genet & Breeding, Beijing, Peoples R China
[5] Chinese Acad Forestry, Res Inst Forestry, Beijing, Peoples R China
[6] Zagazig Univ, Fac Agr, Genet Dept, Zagazig, Egypt
关键词
bacterial diversity; high-throughput sequencing; Sichuan dark tea; pile-fermentation; qPCR; FERMENTATION; FUNGI;
D O I
10.3389/fmicb.2021.735618
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Bacteria and fungi present during pile-fermentation of Sichuan dark tea play a key role in the development of its aesthetic properties, such as color, taste, and fragrance. In our previous study, high-throughput sequencing of dark tea during fermentation revealed Aspergillus was abundant, but scarce knowledge is available about bacterial communities during pile-fermentation. In this study, we rigorously explored bacterial diversity in Sichuan dark tea at each specific stage of piling. Analysis of cluster data revealed 2,948 operational taxonomic units, which were divided into 42 phyla, 98 classes, 247 orders, 461 families, 1,052 genera, and 1,888 species. Certain members of the family Enterobacteriaceae were dominant at early stages of fermentation YC, W1, and W2; Pseudomonas at middle stage W3; and the highest bacterial diversity was observed at the final quality-determining stage W4. Noticeably, probiotics, such as Bacillus, Lactobacillus, Bifidobacterium, and Saccharopolyspora were also significantly higher at the quality-determining stage W4. Our findings might help in precise bacterial inoculation for probiotic food production by increasing the health benefits of Sichuan dark tea. This research also falls under the umbrella of the "Establish Good Health and Well-Being" Sustainable Development Goals of the United Nations Organization.
引用
收藏
页数:9
相关论文
共 40 条
[1]   Characteristic fungi observed in the fermentation process for Puer tea [J].
Abe, Michiharu ;
Takaoka, Naohiro ;
Idemoto, Yoshito ;
Takagi, Chihiro ;
Imai, Takuji ;
Nakasaki, Kiyohiko .
INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY, 2008, 124 (02) :199-203
[2]   Habitat degradation impacts black howler monkey (Alouatta pigra) gastrointestinal microbiomes [J].
Amato, Katherine R. ;
Yeoman, Carl J. ;
Kent, Angela ;
Righini, Nicoletta ;
Carbonero, Franck ;
Estrada, Alejandro ;
Gaskins, H. Rex ;
Stumpf, Rebecca M. ;
Yildirim, Suleyman ;
Torralba, Manolito ;
Gillis, Marcus ;
Wilson, Brenda A. ;
Nelson, Karen E. ;
White, Bryan A. ;
Leigh, Steven R. .
ISME JOURNAL, 2013, 7 (07) :1344-1353
[3]   Minor revision to V4 region SSU rRNA 806R gene primer greatly increases detection of SAR11 bacterioplankton [J].
Apprill, Amy ;
McNally, Sean ;
Parsons, Rachel ;
Weber, Laura .
AQUATIC MICROBIAL ECOLOGY, 2015, 75 (02) :129-137
[4]   Safety Evaluation and Whole-Genome Annotation of Lactobacillus plantarum Strains from Different Sources with Special Focus on Isolates from Green Tea [J].
Arellano, Karina ;
Vazquez, Jorge ;
Park, Haryung ;
Lim, Juhwan ;
Ji, Yosep ;
Kang, Hye-Ji ;
Cho, Donghyun ;
Jeong, Hyun Woo ;
Holzapfel, Wilhelm Heinrich .
PROBIOTICS AND ANTIMICROBIAL PROTEINS, 2020, 12 (03) :1057-1070
[5]  
Chai S., 2015, Journal of Tea Communication, V42, P7
[6]   Biodiversity and Activity of the Gut Microbiota across the Life History of the Insect Herbivore Spodoptera littoralis [J].
Chen, Bosheng ;
Teh, Beng-Soon ;
Sun, Chao ;
Hu, Sirui ;
Lu, Xingmeng ;
Boland, Wilhelm ;
Shao, Yongqi .
SCIENTIFIC REPORTS, 2016, 6
[7]   Metabolic Changes during the Pu-erh Tea Pile-Fermentation Revealed by a Liquid Chromatography Tandem Mass-Spectrometry-Based Metabolomics Approach [J].
Chen, Hongxia ;
Cui, Fengxia ;
Li, Hao ;
Sheng, Jun ;
Lv, Jie .
JOURNAL OF FOOD SCIENCE, 2013, 78 (11) :C1665-C1672
[8]   One-year chronic oral toxicity with combined reproduction toxicity study of a novel probiotic, Bacillus coagulans, as a food ingredient [J].
Endres, J. R. ;
Qureshi, I. ;
Farber, T. ;
Hauswirth, J. ;
Hirka, G. ;
Pasics, I. ;
Schauss, A. G. .
FOOD AND CHEMICAL TOXICOLOGY, 2011, 49 (05) :1174-1182
[9]   PanOCT: automated clustering of orthologs using conserved gene neighborhood for pan-genomic analysis of bacterial strains and closely related species [J].
Fouts, Derrick E. ;
Brinkac, Lauren ;
Beck, Erin ;
Inman, Jason ;
Sutton, Granger .
NUCLEIC ACIDS RESEARCH, 2012, 40 (22) :e172
[10]  
Fu Y.X., 2015, Mod. Food Sci. Technol, V31, P197, DOI [10.13982/j.mfst.1673-9078.2015.3.033, DOI 10.13982/J.MFST.1673-9078.2015.3.033]