19F NMR isotropic chemical shift for efficient screening of fluorinated fragments which are racemates and/or display multiple conformers

被引:7
作者
Dalvit, Claudio [1 ]
Knapp, Stefan [2 ,3 ]
机构
[1] Univ Neuchatel, Fac Sci, CH-2000 Neuchatel, Switzerland
[2] Goethe Univ Frankfurt, Inst Pharmaceut Chem, Riedberg Campus, D-60438 Frankfurt, Germany
[3] Univ Oxford, Nuffield Dept Clin Med, Struct Genom Consortium, Oxford OX3 7DQ, England
关键词
F-19 NMR isotropic chemical shift; F-19 NMR spectroscopy; bromodomain 1 of BRD4; exchange; fragment-based screening; racemates; NUCLEAR-MAGNETIC-RESONANCE; LOCAL ENVIRONMENT; DISCOVERY; INHIBITORS; BINDING; DESIGN; IDENTIFICATION; SPECTROSCOPY; MECHANISMS; GENERATION;
D O I
10.1002/mrc.4640
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Fluorine ligand-based NMR spectroscopy is now an established method for performing binding screening against a macromolecular target. Typically, the transverse relaxation rate of the fluorine signals is monitored in the absence and presence of the target. However, useful structural information can sometimes be obtained from the analysis of the fluorine isotropic chemical shift. This is particularly relevant for molecules that are racemates and/or display multiple conformers. The large difference in fluorine isotropic chemical shift between free and bound state deriving mainly from the breaking and/or making of intramolecular and/or intermolecular hydrogen bonds allows the detection of very weak affinity ligands. According to our experimental results, racemates should always be included in the generation of the fluorinated fragment libraries. The selection or the availability of only one of the enantiomers for the fluorinated screening library could result in missing relevant chemical scaffold motifs.
引用
收藏
页码:1091 / 1095
页数:5
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