The Entropic and Enthalpic Contributions to Force-Dependent Dissociation Kinetics of the Pyrophosphate Bond

被引:38
作者
Hermes, Matthew [1 ]
Boulatov, Roman [1 ]
机构
[1] Univ Illinois, Dept Chem, Urbana, IL 61801 USA
关键词
FREE-ENERGY; STRESS; MODELS;
D O I
10.1021/ja207421v
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
We report quantum-chemical calculations of the activation free energy of solvolysis of the pyrophosphate bond in a conformationally flexible reactant coupled to a constraining potential. The results reveal a significant contribution of conformational entropy to the force-dependent kinetics of even a fairly small reactant, suggesting that accurate predictions or molecular interpretation of localized reaction kinetics in stretched polymers may require explicit consideration of their force-dependent conformational heterogeneity. We further show that modeling the conformational space of the reactant and the transition state as collections of overlapping harmonic wells accurately predicts the force-dependent activation free energy up to 2 nN without detailed quantum-chemical computations. An estimate of the activation energies is obtained from the minimal (Eyring Bell Evans) model using the local coordinate common to all nucleophilic displacement reactions.
引用
收藏
页码:20044 / 20047
页数:4
相关论文
共 34 条
  • [1] [Anonymous], 2011, J MAT CHEM, V21, P8217
  • [2] [Anonymous], DIR MATT EN 5 CHALL
  • [3] [Anonymous], 2007, Continuum Solvation Models in Chemical Physics: From Theory to Applications
  • [4] BELL GI, 1978, SCIENCE, V200, P618, DOI 10.1126/science.347575
  • [5] From molecular mechanochemistry to stress-responsive materials
    Black, Ashley L.
    Lenhardt, Jeremy M.
    Craig, Stephen L.
    [J]. JOURNAL OF MATERIALS CHEMISTRY, 2011, 21 (06) : 1655 - 1663
  • [6] Review of Hierarchical Multiscale Modeling to Describe the Mechanical Behavior of Amorphous Polymers
    Bouvard, J. L.
    Ward, D. K.
    Hossain, D.
    Nouranian, S.
    Marin, E. B.
    Horstemeyer, M. F.
    [J]. JOURNAL OF ENGINEERING MATERIALS AND TECHNOLOGY-TRANSACTIONS OF THE ASME, 2009, 131 (04):
  • [7] Steric and Solvation Effects in Ionic SN2 Reactions
    Chen, Xin
    Regan, Colleen K.
    Craig, Stephen L.
    Krenske, Elizabeth H.
    Houk, K. N.
    Jorgensen, William L.
    Brauman, John I.
    [J]. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2009, 131 (44) : 16162 - 16170
  • [8] Cramer, 2004, ESSENTIALS COMPUTATI
  • [9] Reply to Comment on "A Universal Approach to Solvation Modeling"
    Cramer, Christopher J.
    Truhlar, Donald G.
    [J]. ACCOUNTS OF CHEMICAL RESEARCH, 2009, 42 (04) : 493 - 497
  • [10] Force-Transformed Free-Energy Surfaces and Trajectory-Shooting Simulations Reveal the Mechano-Stereochemistry of Cyclopropane Ring-Opening Reactions
    Dopieralski, Przemyslaw
    Ribas-Arino, Jordi
    Marx, Dominik
    [J]. ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, 2011, 50 (31) : 7105 - 7108