Structural basis for METTL6-mediated m3C RNA methylation

被引:11
作者
Li, Shibiao [1 ]
Zhou, Hualin [1 ]
Liao, Shanhui [1 ]
Wang, Xiaoyang [1 ]
Zhu, Zhongliang [1 ]
Zhang, Jiahai [1 ]
Xu, Chao [1 ]
机构
[1] Univ Sci & Technol China, Sch Life Sci, Div Life Sci & Med,Hefei Natl Lab Phys Sci & Micr, MOE Key Lab Membraneless Organelles & Cellular Dy, Hefei 230027, Peoples R China
基金
中国国家自然科学基金;
关键词
RNA methylation; RNA methyltransferase; Enzyme; 3-methylcytidine (m3C); MESSENGER-RNA; NUCLEAR-RNA; METHYLTRANSFERASE; N6-METHYLADENOSINE; MODEL;
D O I
10.1016/j.bbrc.2021.12.013
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
RNA modifications play important roles in mediating the biological functions of RNAs. 3-methylcytidine (m3C), albeit less abundant, is found to exist extensively in tRNAs, rRNAs and mRNAs. Human METTL6 is a m(3)C methyltransferase for tRNAs, including tRNA(SER(UGA)). We solved the structure of human METTL6 in the presence of S-adenosyl-L-methionine and found by enzyme assay that recombinant human METTL6 is active towards tRNA(SER(UGA)). Structural analysis indicated the detailed interactions between S-adenosyl-L-methionine and METTL6, and suggested potential tRNA binding region on the surface of METTL6. The structural research, complemented by biochemistry enzyme assay, will definitely shed light on the design of potent inhibitors for METTL6 in near future. (c) 2021 Elsevier Inc. All rights reserved.
引用
收藏
页码:159 / 164
页数:6
相关论文
共 25 条
  • [1] PHENIX:: building new software for automated crystallographic structure determination
    Adams, PD
    Grosse-Kunstleve, RW
    Hung, LW
    Ioerger, TR
    McCoy, AJ
    Moriarty, NW
    Read, RJ
    Sacchettini, JC
    Sauter, NK
    Terwilliger, TC
    [J]. ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 2002, 58 : 1948 - 1954
  • [2] Coot:: model-building tools for molecular graphics
    Emsley, P
    Cowtan, K
    [J]. ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 2004, 60 : 2126 - 2132
  • [3] Methyltransferase-Glo: a universal, bioluminescent and homogenous assay for monitoring all classes of methyltransferases
    Hsiao, Kevin
    Zegzouti, Hicham
    Goueli, Said A.
    [J]. EPIGENOMICS, 2016, 8 (03) : 321 - 339
  • [4] METTL6 is a tRNA m3C methyltransferase that regulates pluripotency and tumor cell growth
    Ignatova, Valentina V.
    Kaiser, Steffen
    Ho, Jessica Sook Yuin
    Bing, Xinyang
    Stolz, Paul
    Tan, Ying Xim
    Lee, Chee Leng
    Gay, Florence Pik Hoon
    Lastres, Palma Rico
    Gerlini, Raffaele
    Rathkolb, Birgit
    Aguilar-Pimentel, Antonio
    Sanz-Moreno, Adrian
    Klein-Rodewald, Tanja
    Calzada-Wack, Julia
    Ibragimov, Emil
    Valenta, Magdalena
    Lukauskas, Saulius
    Pavesi, Andrea
    Marschall, Susan
    Leuchtenberger, Stefanie
    Fuchs, Helmut
    Gailus-Durner, Valerie
    De Angelis, Martin Hrabe
    Bultmann, Sebastian
    Rando, Oliver J.
    Guccione, Ernesto
    Kellner, Stefanie M.
    Schneider, Robert
    [J]. SCIENCE ADVANCES, 2020, 6 (35)
  • [5] METHYLATED BASES OF RIBOSOMAL RIBONUCLEIC ACID FROM HELA CELLS
    IWANAMI, Y
    BROWN, GM
    [J]. ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS, 1968, 126 (01) : 8 - &
  • [6] Jia GF, 2011, NAT CHEM BIOL, V7, P885, DOI [10.1038/NCHEMBIO.687, 10.1038/nchembio.687]
  • [7] Modifications of Small RNAs and Their Associated Proteins
    Kim, Young-Kook
    Heo, Inha
    Kim, V. Narry
    [J]. CELL, 2010, 143 (05) : 703 - 709
  • [8] A new modification for mammalian messenger RNA
    Liu, Fange
    He, Chuan
    [J]. JOURNAL OF BIOLOGICAL CHEMISTRY, 2017, 292 (35) : 14704 - 14705
  • [9] A METTL3-METTL14 complex mediates mammalian nuclear RNA N6-adenosine methylation
    Liu, Jianzhao
    Yue, Yanan
    Han, Dali
    Wang, Xiao
    Fu, Ye
    Zhang, Liang
    Jia, Guifang
    Yu, Miao
    Lu, Zhike
    Deng, Xin
    Dai, Qing
    Chen, Weizhong
    He, Chuan
    [J]. NATURE CHEMICAL BIOLOGY, 2014, 10 (02) : 93 - 95
  • [10] HKL-3000:: the integration of data reduction and structure solution -: from diffraction images to an initial model in minutes
    Minor, Wladek
    Cymborowski, Marcin
    Otwinowski, Zbyszek
    Chruszcz, Maksymilian
    [J]. ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 2006, 62 : 859 - 866