Complete genome sequence of Finegoldia magna, an anaerobic opportunistic pathogen

被引:36
作者
Goto, Takatsugu [1 ]
Yamashita, Atsushi [2 ]
Hirakawa, Hideki [3 ]
Matsutani, Minenosuke [4 ]
Todo, Kozo [1 ,5 ]
Ohshima, Kenshiro [2 ,6 ]
Toh, Hidehiro [2 ,7 ]
Miyamoto, Kazuaki [1 ]
Kuhara, Satoru [4 ]
Hattori, Masahira [2 ,6 ,8 ]
Shimizu, Tohru [9 ]
Akimoto, Shigeru [1 ]
机构
[1] Wakayama Med Univ, Dept Microbiol, Wakayama 6410012, Japan
[2] Kitasato Univ, Kitasato Inst Life Sci, Lab Genom Informat, Kanagawa 2288555, Japan
[3] Kyushu Univ, Grad Sch Syst Life Sci, Higashi Ku, Fukuoka 8128581, Japan
[4] Kyushu Univ, Grad Sch Genet Resource Technol, Higashi Ku, Fukuoka 8128581, Japan
[5] Wakayama Med Univ, Dept Oral & Maxillofacial Surg, Wakayama 6410012, Japan
[6] Univ Tokyo, Grad Sch Frontier Sci, Dept Computat Biol, Chiba 2778561, Japan
[7] RIKEN, Genome Sci Ctr, Computat & Expt Syst Biol Grp, Tsurumi Ku, Kanagawa 2300045, Japan
[8] RIKEN, Genome Sci Ctr, Genome Core Technol Facil, Tsurumi Ku, Kanagawa 2300045, Japan
[9] Kanazawa Univ, Grad Sch Med Sci, Dept Bacteriol, Kanazawa, Ishikawa 9208640, Japan
关键词
whole genome sequence; gram-positive anaerobic cocci; Peptostreptococcus magnus; albumin-binding protein; sortase;
D O I
10.1093/dnares/dsm030
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Finegoldia magna (formerly Peptostreptococcus magnus), a member of the Gram-positive anaerobic cocci (GPAC), is a commensal bacterium colonizing human skin and mucous membranes. Moreover, it is also recognized as an opportunistic pathogen responsible for various infectious diseases. Here, we report the complete genome sequence of F. magna ATCC 29328. The genome consists of a 1 797 577 bp circular chromosome and an 189 163 bp plasmid (pPEP1). The metabolic maps constructed based on the genome information confirmed that most F. magna strains cannot ferment most sugars, except fructose, and have various aminopeptidase activities. Three homologs of albumin-binding protein, a known virulence factor useful for antiphagocytosis, are encoded on the chromosome, and one albumin-binding protein homolog is encoded on the plasmid. A unique feature of the genome is that F. magna encodes many sortase genes, of which substrates may be involved in bacterial pathogenesis, such as antiphagocytosis and adherence to the host cell. The plasmid pPEP1 encodes seven sortase and seven substrate genes, whereas the chromosome encodes four sortase and 19 substrate genes. These plasmid-encoded sortases may play important roles in the pathogenesis of F. magna by enriching the variety of cell wall anchored surface proteins.
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页码:39 / 47
页数:9
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