Drill-assisted genomic DNA extraction from Botrytis cinerea

被引:5
作者
Gonzalez, Celedonio [1 ]
Noda, Judith [1 ]
Espino, Jose J. [1 ]
Brito, Nelida [1 ]
机构
[1] Univ La Laguna, Dept Bioquim & Biol Mol, E-38206 Tenerife, Spain
关键词
Botrytis cinerea; DNA extraction; PCR; Southern-blot;
D O I
10.1007/s10529-008-9790-6
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Current DNA extraction protocols for genomic DNA from Botrytis cinerea almost always start with mycelium that has been reduced to powder with liquid N-2 in a mortar, and this makes their application to a large number of samples slow and cumbersome. Here we present an adaptation of an existing method [Moller et al. (1992) Nucleic Acids Res 20: 6115-6116] for which the initial steps have been modified, including the homogenization of the fungus with sand and the aid of a common household drill. This method allows the processing of large number of samples in much shorter times and generates an average of 4 mu g DNA per sample, of sufficient quality for use in PCR and Southern blotting.
引用
收藏
页码:1989 / 1992
页数:4
相关论文
共 10 条
[1]   Fungal and plant gene expression during synchronized infection of tomato leaves by Botrytis cinerea [J].
Benito, EP ;
ten Have, A ;
van't Klooster, JW ;
van Kan, JAL .
EUROPEAN JOURNAL OF PLANT PATHOLOGY, 1998, 104 (02) :207-220
[2]   Ultra-rapid preparation of total genomic DNA from isolates of yeast and mould using Whatman FTA filter paper technology - a reusable DNA archiving system [J].
Borman, Andrew M. ;
Linton, Christopher J. ;
Miles, Sarah-Jane ;
Campbell, Colin K. ;
Johnson, Elizabeth M. .
MEDICAL MYCOLOGY, 2006, 44 (05) :389-398
[3]   Rapid isolation of fungal genomic DNA suitable for long distance PCR [J].
De Maeseneire, S. L. ;
Van Bogaert, I. N. ;
Dauvrin, T. ;
Soetaert, W. K. ;
Vandamme, E. J. .
BIOTECHNOLOGY LETTERS, 2007, 29 (12) :1845-1855
[4]  
Melo SCO, 2006, GENET MOL RES, V5, P851
[5]   A SIMPLE AND EFFICIENT PROTOCOL FOR ISOLATION OF HIGH-MOLECULAR-WEIGHT DNA FROM FILAMENTOUS FUNGI, FRUIT BODIES, AND INFECTED-PLANT TISSUES [J].
MOLLER, EM ;
BAHNWEG, G ;
SANDERMANN, H ;
GEIGER, HH .
NUCLEIC ACIDS RESEARCH, 1992, 20 (22) :6115-6116
[6]   Methodological improvements in the expression of foreign genes and in gene replacement in the phytopathogenic fungus Botrytis cinerea [J].
Noda, Judith ;
Brito, Nelida ;
Espino, Jose J. ;
Gonzalez, Celedonio .
MOLECULAR PLANT PATHOLOGY, 2007, 8 (06) :811-816
[7]  
Sambrook J, 2001, Molecular Cloning: A Laboratory Manual
[8]   High-throughput genotyping of filamentous fungus Aspergillus oryzae based on colony direct polymerase chain reaction [J].
Suzuki, Satoshi ;
Taketani, Hiroko ;
Kusumoto, Ken-Ichi ;
Kashiwagi, Yutaka .
JOURNAL OF BIOSCIENCE AND BIOENGINEERING, 2006, 102 (06) :572-574
[9]   A simple protocol for isolation of fungal DNA [J].
Tendulkar, SR ;
Gupta, A ;
Chattoo, BB .
BIOTECHNOLOGY LETTERS, 2003, 25 (22) :1941-1944
[10]   Comparison of rapid DNA extraction methods applied to PCR identification of medicinal mushroom Ganoderma spp. [J].
Zhou, Xuanwei ;
Li, Qizhang ;
Zhao, Jingya ;
Tang, Kexuan ;
Lin, Juan ;
Yin, Yizhou .
PREPARATIVE BIOCHEMISTRY & BIOTECHNOLOGY, 2007, 37 (04) :369-380