The role of porphyrin peripheral substituents in determining the reactivities of ferrous nitrosyl species

被引:20
作者
Amanullah, Sk [1 ]
Dey, Abhishek [1 ]
机构
[1] Indian Assoc Cultivat Sci, Sch Chem Sci, 2A & 2B Raja SC Mullick Rd, Kolkata 700032, India
关键词
REDUCTASE MODEL COMPOUNDS; CYTOCHROME CD(1) NITRITE; PI-CATION RADICALS; DISSIMILATORY NITRITE; ELECTRONIC-STRUCTURE; OXIDE REDUCTASE; REDOX CHEMISTRY; HYDRIDE ATTACK; HEME-NITROSYLS; D(1) HEME;
D O I
10.1039/d0sc01625j
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Ferrous nitrosyl {FeNO}(7)species is an intermediate common to the catalytic cycles of Cd1NiR and CcNiR, two heme-based nitrite reductases (NiR), and its reactivity varies dramatically in these enzymes. The former reduces NO(2)(-)to NO in the denitrification pathway while the latter reduces NO(2)(-)to NH(4)(+)in a dissimilatory nitrite reduction. With very similar electron transfer partners and heme based active sites, the origin of this difference in reactivity has remained unexplained. Differences in the structure of the hemed(1)(Cd1NiR), which bears electron-withdrawing groups and has saturated pyrroles, relative to hemec(CcNiR) are often invoked to explain these reactivities. A series of iron porphyrinoids, designed to model the electron-withdrawing peripheral substitution as well as the saturation present in hemed(1)in Cd1NiR, and their NO adducts were synthesized and their properties were investigated. The data clearly show that the presence of electron-withdrawing groups (EWGs) and saturated pyrroles together in a synthetic porphyrinoid (FeDEsC) weakens the Fe-NO bond in {FeNO}(7)adducts along with decreasing the bond dissociation free energies (BDFENH) of the {FeHNO}(8)species. The EWG raises theE degrees of the {FeNO}(7/8)process, making the electron transfer (ET) facile, but decreases the pK(a)of {FeNO}(8)species, making protonation (PT) difficult, while saturation has the opposite effect. The weakening of the Fe-NO bonding biases the {FeNO}(7)species of FeDEsC for NO dissociation, as in Cd1NiR, which is otherwise set-up for a proton-coupled electron transfer (PCET) to form an {FeHNO}(8)species eventually leading to its further reduction to NH4+.
引用
收藏
页码:5909 / 5921
页数:13
相关论文
共 78 条
[1]   Over or under: hydride attack at the metal versus the coordinated nitrosyl ligand in ferric nitrosyl porphyrins [J].
Abucayon, E. G. ;
Khade, R. L. ;
Powell, D. R. ;
Shaw, M. J. ;
Zhang, Y. ;
Richter-Addo, G. B. .
DALTON TRANSACTIONS, 2016, 45 (45) :18259-18266
[2]   Hydride Attack on a Coordinated Ferric Nitrosyl: Experimental and DFT Evidence for the Formation of a Heme Model-HNO Derivative [J].
Abucayon, Erwin G. ;
Khade, Rahul L. ;
Powell, Douglas R. ;
Zhang, Yong ;
Richter-Addo, George B. .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2016, 138 (01) :104-107
[3]   Trapping of a Putative Intermediate in the Cytochrome c Nitrite Reductase (ccNiR)-Catalyzed Reduction of Nitrite: Implications for the ccNiR Reaction Mechanism [J].
Ali, Mahbbat ;
Stein, Natalia ;
Mao, Yingxi ;
Shahid, Shahid ;
Schmidt, Marius ;
Bennett, Brian ;
Pacheco, A. Andrew .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2019, 141 (34) :13358-13371
[4]   A needle in a haystack:: The active site of the membrane-bound complex cytochrome c nitrite reductase [J].
Almeida, M. Gabriela ;
Silveira, Celia M. ;
Guigliarelli, Bruno ;
Bertrand, Patrick ;
Moura, Jose J. G. ;
Moura, Isabel ;
Leger, Christophe .
FEBS LETTERS, 2007, 581 (02) :284-288
[5]   Synthetic Iron Porphyrins for Probing the Differences in the Electronic Structures of Heme a3, Heme d, and Heme d1 [J].
Amanullah, Sk ;
Saha, Paramita ;
Saha, Rajat ;
Dey, Abhishek .
INORGANIC CHEMISTRY, 2019, 58 (01) :152-164
[6]   Tuning the thermodynamic onset potential of electrocatalytic O2 reduction reaction by synthetic iron-porphyrin complexes [J].
Amanullah, Sk ;
Das, Pradip Kumar ;
Samanta, Subhra ;
Dey, Abhishek .
CHEMICAL COMMUNICATIONS, 2015, 51 (49) :10010-10013
[7]   Dissimilatory nitrite and nitric oxide reductases [J].
Averill, BA .
CHEMICAL REVIEWS, 1996, 96 (07) :2951-2964
[8]   ELECTROCATALYTIC REDUCTION OF NITRITE TO AMMONIA BASED ON A WATER-SOLUBLE IRON PORPHYRIN [J].
BARLEY, MH ;
TAKEUCHI, KJ ;
MEYER, TJ .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1986, 108 (19) :5876-5885
[9]   The reduction potential of nitric oxide (NO) and its importance to NO biochemistry [J].
Bartberger, MD ;
Liu, W ;
Ford, E ;
Miranda, KM ;
Switzer, C ;
Fukuto, JM ;
Farmer, PJ ;
Wink, DA ;
Houk, KN .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2002, 99 (17) :10958-10963
[10]   LIGAND-PROMOTED RAPID NITRIC-OXIDE DISSOCIATION FROM FERROUS PORPHYRIN NITROSYLS [J].
BOHLE, DS ;
HUNG, CH .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1995, 117 (37) :9584-9585