Comprehensive Analysis of Hexokinase 2 Immune Infiltrates and m6A Related Genes in Human Esophageal Carcinoma

被引:12
|
作者
Liu, Xu-Sheng [1 ,2 ,3 ]
Liu, Jia-Min [4 ,5 ]
Chen, Yi-Jia [1 ,2 ]
Li, Fu-Yan [1 ,2 ]
Wu, Rui-Min [1 ,2 ]
Tan, Fan [1 ,2 ]
Zeng, Dao-Bing [1 ,2 ]
Li, Wei [1 ,2 ]
Zhou, Hong [1 ,2 ]
Gao, Yan [1 ,2 ]
Pei, Zhi-Jun [1 ,2 ,3 ]
机构
[1] Hubei Univ Med, Taihe Hosp, Dept Nucl Med, Shiyan, Peoples R China
[2] Hubei Univ Med, Taihe Hosp, Inst Anesthesiol & Pain, Shiyan, Peoples R China
[3] Hubei Univ Med, Taihe Hosp, Hubei Clin Res Ctr Precise Diag & Treatment Liver, Shiyan, Peoples R China
[4] Shiyan Emergency Med Ctr, Shiyan, Peoples R China
[5] Hubei Univ Med, Sch Publ Hlth, Shiyan, Peoples R China
来源
FRONTIERS IN CELL AND DEVELOPMENTAL BIOLOGY | 2021年 / 9卷
关键词
HK2; esophageal carcinoma; immune infiltration; m6A modification; tumor microenvironment; EXPRESSION PROFILES; CELL CARCINOMA; REVEALS; ADENOCARCINOMA; OVEREXPRESSION; SUBTYPE; TISSUE; PROGRESSION; PREDICTION; PATTERNS;
D O I
10.3389/fcell.2021.715883
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
Background: Hexokinase 2 not only plays a role in physiological function of human normal tissues and organs, but also plays a vital role in the process of glycolysis of tumor cells. However, there are few comprehensive studies on HK2 in esophageal carcinoma (ESCA) needs further study. Methods: Oncomine, Tumor Immune Estimation Resource (TIMER), The Cancer Genome Atlas (TCGA) and Gene Expression Omnibus (GEO) database were used to analyze the expression differences of HK2 in Pan-cancer and ESCA cohort, and to analyze the correlation between HK2 expression level and clinicopathological features of TCGA ESCA samples. GO/KEGG, GGI, and PPI analysis of HK2 was performed using R software, LinkedOmics, GeneMANIA and STRING online tools. The correlation between HK2 and ESCA immune infiltration was analyzed TIMER and TCGA ESCA cohort. The correlation between HK2 expression level and m6A modification of ESCA was analyzed by utilizing TCGA ESCA cohort. Results: HK2 is highly expressed in a variety of tumors, and its high expression level in ESCA is closely related to the weight, cancer stages, tumor histology and tumor grade of ESCA. The analysis results of GO/KEGG showed that HK2 was closely related to cell adhesion molecule binding, cell-cell junction, ameboidal-type cell migration, insulin signaling pathway, hif-1 signaling pathway, and insulin resistance. GGI showed that HK2 associated genes were mainly involved in the glycolytic pathway. PPI showed that HK2 was closely related to HK1, GPI, and HK3, all of which played an important role in tumor proliferation. The analysis results of TIMER and TCGA ESCA cohort indicated that the HK2 expression level was related to the infiltration of various immune cells. TCGA ESCA cohort analyze indicated that the HK2 expression level was correlated with m6A modification genes. Conclusion: HK2 is associated with tumor immune infiltration and m6A modification of ESCA, and can be used as a potential biological target for diagnosis and therapy of ESCA.
引用
收藏
页数:16
相关论文
共 50 条
  • [31] Immune Infiltrates of m6A RNA Methylation-Related lncRNAs and Identification of PD-L1 in Patients With Primary Head and Neck Squamous Cell Carcinoma
    Feng, Zi-Yi
    Gao, Hao-Yu
    Feng, Tian-Da
    FRONTIERS IN CELL AND DEVELOPMENTAL BIOLOGY, 2021, 9
  • [32] Comprehensive Analysis of the Immune Infiltrates of Pyroptosis in Kidney Renal Clear Cell Carcinoma
    Sun, Zhuolun
    Jing, Changying
    Guo, Xudong
    Zhang, Mingxiao
    Kong, Feng
    Wang, Zhenqing
    Jiang, Shaobo
    Wang, Hanbo
    FRONTIERS IN ONCOLOGY, 2021, 11
  • [33] Gene Signatures and Prognostic Values of m6A Genes in Nasopharyngeal Carcinoma
    Lu, Shanshan
    Yu, Zhengzheng
    Xiao, Zhiqiang
    Zhang, Yiya
    FRONTIERS IN ONCOLOGY, 2020, 10
  • [34] Comprehensive Analysis of m6A RNA Methylation Regulators and the Immune Microenvironment to Aid Immunotherapy in Pancreatic Cancer
    Guo, Yongdong
    Wang, Ronglin
    Li, Junqiang
    Song, Yang
    Min, Jie
    Zhao, Ting
    Hua, Lei
    Shi, Jingjie
    Zhang, Chao
    Ma, Peixiang
    Yang, Cheng
    Zhu, Liaoliao
    Gan, Dongxue
    Li, Shanshan
    Liu, Xiaonan
    Su, Haichuan
    FRONTIERS IN IMMUNOLOGY, 2021, 12
  • [35] Prognosis Analysis and Validation of m6A Signature and Tumor Immune Microenvironment in Glioma
    Lin, Shaojian
    Xu, Houshi
    Zhang, Anke
    Ni, Yunjia
    Xu, Yuanzhi
    Meng, Tong
    Wang, Mingjie
    Lou, Meiqing
    FRONTIERS IN ONCOLOGY, 2020, 10
  • [36] Bioinformatics analysis and verification of m6A related genes based on the construction of keloid diagnostic model
    Yang, Ronghua
    Wang, Xiaoxiang
    Zheng, Wenlian
    Chen, Wentao
    Gan, Wenjun
    Qin, Xinchi
    Huang, Jie
    Chen, Xiaodong
    Zhou, Sitong
    INTERNATIONAL WOUND JOURNAL, 2023, 20 (07) : 2700 - 2717
  • [37] Comprehensive Analysis Revealed that CDKN2A is a Biomarker for Immune Infiltrates in Multiple Cancers
    Chen, Zheng
    Guo, Yingjie
    Zhao, Da
    Zou, Quan
    Yu, Fusheng
    Zhang, Lijun
    Xu, Lei
    FRONTIERS IN CELL AND DEVELOPMENTAL BIOLOGY, 2021, 9
  • [38] Comprehensive Analysis of Clinical Significance, Immune Infiltration and Biological Role of m6A Regulators in Early-Stage Lung Adenocarcinoma
    Zhou, Bolun
    Gao, Shugeng
    FRONTIERS IN IMMUNOLOGY, 2021, 12
  • [39] METTL3/m6A/IFIT2 regulates proliferation, invasion and immunity in esophageal squamous cell carcinoma
    Ge, Fangfang
    Li, Zhenyu
    Hu, Jiaru
    Pu, Youguang
    Zhao, Fangfang
    Kong, Lingsuo
    FRONTIERS IN PHARMACOLOGY, 2022, 13
  • [40] A Comprehensive Functional Analysis Indicates CNDP1 Mitigates Hepatocellular Carcinoma and May Be Associated with Immune Cell Infiltration and m6A-Related Genes
    Wen, C.
    Shi, R. L.
    An, Y. L.
    Zhang, S. T.
    Wang, T.
    Luo, H.
    RUSSIAN JOURNAL OF GENETICS, 2024, 60 (09) : 1264 - 1281