4S-DT: Self-Supervised Super Sample Decomposition for Transfer Learning With Application to COVID-19 Detection

被引:41
作者
Abbas, Asmaa [1 ]
Abdelsamea, Mohammed M. [2 ,3 ]
Gaber, Mohamed Medhat [2 ]
机构
[1] Univ Assiut, Dept Math, Asyut 71515, Egypt
[2] Birmingham City Univ, Sch Comp & Digital Technol, Birmingham B4 7AP, W Midlands, England
[3] Univ Assiut, Fac Comp & Informat, Dept Comp Sci, Asyut 71515, Egypt
关键词
Biomedical imaging; COVID-19; X-ray imaging; Task analysis; Training; Transfer learning; Feature extraction; Chest X-ray image classification; convolutional neural network (CNN); data irregularities; self-supervision; transfer learning; CLASSIFICATION;
D O I
10.1109/TNNLS.2021.3082015
中图分类号
TP18 [人工智能理论];
学科分类号
081104 ; 0812 ; 0835 ; 1405 ;
摘要
Due to the high availability of large-scale annotated image datasets, knowledge transfer from pretrained models showed outstanding performance in medical image classification. However, building a robust image classification model for datasets with data irregularity or imbalanced classes can be a very challenging task, especially in the medical imaging domain. In this article, we propose a novel deep convolutional neural network, which we called self-supervised super sample decomposition for transfer learning (4S-DT) model. The 4S-DT encourages a coarse-to-fine transfer learning from large-scale image recognition tasks to a specific chest X-ray image classification task using a generic self-supervised sample decomposition approach. Our main contribution is a novel self-supervised learning mechanism guided by a super sample decomposition of unlabeled chest X-ray images. 4S-DT helps in improving the robustness of knowledge transformation via a downstream learning strategy with a class-decomposition (CD) layer to simplify the local structure of the data. The 4S-DT can deal with any irregularities in the image dataset by investigating its class boundaries using a downstream CD mechanism. We used 50000 unlabeled chest X-ray images to achieve our coarse-to-fine transfer learning with an application to COVID-19 detection, as an exemplar. The 4S-DT has achieved a high accuracy of 99.8% on the larger of the two datasets used in the experimental study and an accuracy of 97.54% on the smaller dataset, which was enriched by augmented images, out of which all real COVID-19 cases were detected.
引用
收藏
页码:2798 / 2808
页数:11
相关论文
共 41 条
[1]   DeTrac: Transfer Learning of Class Decomposed Medical Images in Convolutional Neural Networks [J].
Abbas, Asmaa ;
Abdelsamea, M. O. H. A. M. M. E. D. M. ;
Gaber, Mohamed Medhat .
IEEE ACCESS, 2020, 8 (08) :74901-74913
[2]  
Abbas A, 2018, PROCEEDINGS OF 2018 13TH INTERNATIONAL CONFERENCE ON COMPUTER ENGINEERING AND SYSTEMS (ICCES), P122, DOI 10.1109/ICCES.2018.8639200
[3]  
[Anonymous], 2020, Coronavirus disease (COVID-19) advice for the public: mythbusters
[4]   Covid-19: automatic detection from X-ray images utilizing transfer learning with convolutional neural networks [J].
Apostolopoulos, Ioannis D. ;
Mpesiana, Tzani A. .
PHYSICAL AND ENGINEERING SCIENCES IN MEDICINE, 2020, 43 (02) :635-640
[5]   Lung Segmentation in Chest Radiographs Using Anatomical Atlases With Nonrigid Registration [J].
Candemir, Sema ;
Jaeger, Stefan ;
Palaniappan, Kannappan ;
Musco, Jonathan P. ;
Singh, Rahul K. ;
Xue, Zhiyun ;
Karargyris, Alexandros ;
Antani, Sameer ;
Thoma, George ;
McDonald, Clement J. .
IEEE TRANSACTIONS ON MEDICAL IMAGING, 2014, 33 (02) :577-590
[6]   Deep Clustering for Unsupervised Learning of Visual Features [J].
Caron, Mathilde ;
Bojanowski, Piotr ;
Joulin, Armand ;
Douze, Matthijs .
COMPUTER VISION - ECCV 2018, PT XIV, 2018, 11218 :139-156
[7]   Self-supervised learning for medical image analysis using image context restoration [J].
Chen, Liang ;
Bentley, Paul ;
Mori, Kensaku ;
Misawa, Kazunari ;
Fujiwara, Michitaka ;
Rueckert, Daniel .
MEDICAL IMAGE ANALYSIS, 2019, 58
[8]  
Cohen J.P., 2020, arXiv
[9]  
Dandil E, 2014, 2014 6TH INTERNATIONAL CONFERENCE OF SOFT COMPUTING AND PATTERN RECOGNITION (SOCPAR), P382, DOI 10.1109/SOCPAR.2014.7008037
[10]   The Role of Imaging in the Detection and Management of COVID-19: A Review [J].
Dong, Di ;
Tang, Zhenchao ;
Wang, Shuo ;
Hui, Hui ;
Gong, Lixin ;
Lu, Yao ;
Xue, Zhong ;
Liao, Hongen ;
Chen, Fang ;
Yang, Fan ;
Jin, Ronghua ;
Wang, Kun ;
Liu, Zhenyu ;
Wei, Jingwei ;
Mu, Wei ;
Zhang, Hui ;
Jiang, Jingying ;
Tian, Jie ;
Li, Hongjun .
IEEE REVIEWS IN BIOMEDICAL ENGINEERING, 2021, 14 :16-29