共 30 条
Studies on substrate specificity of Jmjd2a-c histone demethylases
被引:10
作者:

Ponnaluri, V. K. Chaithanya
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机构:
Univ Missouri, Div Pharmaceut Sci, Sch Pharm, Kansas City, MO 64108 USA Univ Missouri, Div Pharmaceut Sci, Sch Pharm, Kansas City, MO 64108 USA

Vavilala, Divya Teja
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机构:
Univ Missouri, Div Pharmaceut Sci, Sch Pharm, Kansas City, MO 64108 USA Univ Missouri, Div Pharmaceut Sci, Sch Pharm, Kansas City, MO 64108 USA

Mukherji, Mridul
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h-index: 0
机构:
Univ Missouri, Div Pharmaceut Sci, Sch Pharm, Kansas City, MO 64108 USA Univ Missouri, Div Pharmaceut Sci, Sch Pharm, Kansas City, MO 64108 USA
机构:
[1] Univ Missouri, Div Pharmaceut Sci, Sch Pharm, Kansas City, MO 64108 USA
关键词:
Epigenetics;
Demethylase;
Dioxygenase;
Enzyme assay;
Transcription regulation;
Jumonji domain;
PHYTANOYL-COA;
2-HYDROXYLASE;
HYPOXIA-INDUCIBLE FACTOR;
LYSINE METHYLTRANSFERASE;
KAPPA-B;
DOMAIN;
METHYLATION;
PROTEIN;
H3;
HYDROXYLATION;
RECOGNITION;
D O I:
10.1016/j.bbrc.2011.01.073
中图分类号:
Q5 [生物化学];
Q7 [分子生物学];
学科分类号:
071010 ;
081704 ;
摘要:
Jumonji domain containing iron (II), 2-oxoglutarate (2OG)-dependent dioxygenases from Jmjd2 family demethylate trimethylated histone3-lysine 9 (H3-K9me3), and also H3-K9me2 and H3-K36me3, albeit at lower rates. Recently, we have identified the first non-histone substrates of JmjD2 demethylases. Here, we studied the substrate specificity of Jmjd2a-c demethylases using site-directed mutagenesis and novel non-histone substrates. We identified preference of Arg at -1 position and a smaller amino acid at -2 position using both singly and doubly mutated peptide substrates by Jmjd2a-c demethylases. Our results also identified similarities in substrate selectivity by H3-K9 methyltransferase, G9a and Jmjd2 demethylases despite their distinct reaction mechanisms. Published by Elsevier Inc.
引用
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页码:588 / 592
页数:5
相关论文
共 30 条
[1]
Lysine Acetylation Targets Protein Complexes and Co-Regulates Major Cellular Functions
[J].
Choudhary, Chunaram
;
Kumar, Chanchal
;
Gnad, Florian
;
Nielsen, Michael L.
;
Rehman, Michael
;
Walther, Tobias C.
;
Olsen, Jesper V.
;
Mann, Matthias
.
SCIENCE,
2009, 325 (5942)
:834-840

Choudhary, Chunaram
论文数: 0 引用数: 0
h-index: 0
机构:
Max Planck Inst Biochem, D-82152 Martinsried, Germany
Univ Copenhagen, Fac Hlth Sci, Novo Nordisk Fdn Ctr Prot Res, DK-2200 Copenhagen, Denmark Max Planck Inst Biochem, D-82152 Martinsried, Germany

Kumar, Chanchal
论文数: 0 引用数: 0
h-index: 0
机构:
Max Planck Inst Biochem, D-82152 Martinsried, Germany Max Planck Inst Biochem, D-82152 Martinsried, Germany

Gnad, Florian
论文数: 0 引用数: 0
h-index: 0
机构:
Max Planck Inst Biochem, D-82152 Martinsried, Germany Max Planck Inst Biochem, D-82152 Martinsried, Germany

Nielsen, Michael L.
论文数: 0 引用数: 0
h-index: 0
机构:
Max Planck Inst Biochem, D-82152 Martinsried, Germany
Univ Copenhagen, Fac Hlth Sci, Novo Nordisk Fdn Ctr Prot Res, DK-2200 Copenhagen, Denmark Max Planck Inst Biochem, D-82152 Martinsried, Germany

Rehman, Michael
论文数: 0 引用数: 0
h-index: 0
机构:
Max Planck Inst Biochem, D-82152 Martinsried, Germany Max Planck Inst Biochem, D-82152 Martinsried, Germany

Walther, Tobias C.
论文数: 0 引用数: 0
h-index: 0
机构:
Max Planck Inst Biochem, D-82152 Martinsried, Germany Max Planck Inst Biochem, D-82152 Martinsried, Germany

Olsen, Jesper V.
论文数: 0 引用数: 0
h-index: 0
机构:
Max Planck Inst Biochem, D-82152 Martinsried, Germany
Univ Copenhagen, Fac Hlth Sci, Novo Nordisk Fdn Ctr Prot Res, DK-2200 Copenhagen, Denmark Max Planck Inst Biochem, D-82152 Martinsried, Germany

Mann, Matthias
论文数: 0 引用数: 0
h-index: 0
机构:
Max Planck Inst Biochem, D-82152 Martinsried, Germany
Univ Copenhagen, Fac Hlth Sci, Novo Nordisk Fdn Ctr Prot Res, DK-2200 Copenhagen, Denmark Max Planck Inst Biochem, D-82152 Martinsried, Germany
[2]
Regulation of p53 activity through lysine methylation
[J].
Chuikov, S
;
Kurash, JK
;
Wilson, JR
;
Xiao, B
;
Justin, N
;
Ivanov, GS
;
McKinney, K
;
Tempst, P
;
Prives, C
;
Gamblin, SJ
;
Barlev, NA
;
Reinberg, D
.
NATURE,
2004, 432 (7015)
:353-360

Chuikov, S
论文数: 0 引用数: 0
h-index: 0
机构: Robert Wood Johnson Med Sch, Dept Biochem, Howard Hughes Med Inst, Div Nucl Acids Enzymol, Piscataway, NJ 08854 USA

Kurash, JK
论文数: 0 引用数: 0
h-index: 0
机构: Robert Wood Johnson Med Sch, Dept Biochem, Howard Hughes Med Inst, Div Nucl Acids Enzymol, Piscataway, NJ 08854 USA

Wilson, JR
论文数: 0 引用数: 0
h-index: 0
机构: Robert Wood Johnson Med Sch, Dept Biochem, Howard Hughes Med Inst, Div Nucl Acids Enzymol, Piscataway, NJ 08854 USA

Xiao, B
论文数: 0 引用数: 0
h-index: 0
机构: Robert Wood Johnson Med Sch, Dept Biochem, Howard Hughes Med Inst, Div Nucl Acids Enzymol, Piscataway, NJ 08854 USA

Justin, N
论文数: 0 引用数: 0
h-index: 0
机构: Robert Wood Johnson Med Sch, Dept Biochem, Howard Hughes Med Inst, Div Nucl Acids Enzymol, Piscataway, NJ 08854 USA

Ivanov, GS
论文数: 0 引用数: 0
h-index: 0
机构: Robert Wood Johnson Med Sch, Dept Biochem, Howard Hughes Med Inst, Div Nucl Acids Enzymol, Piscataway, NJ 08854 USA

McKinney, K
论文数: 0 引用数: 0
h-index: 0
机构: Robert Wood Johnson Med Sch, Dept Biochem, Howard Hughes Med Inst, Div Nucl Acids Enzymol, Piscataway, NJ 08854 USA

Tempst, P
论文数: 0 引用数: 0
h-index: 0
机构: Robert Wood Johnson Med Sch, Dept Biochem, Howard Hughes Med Inst, Div Nucl Acids Enzymol, Piscataway, NJ 08854 USA

Prives, C
论文数: 0 引用数: 0
h-index: 0
机构: Robert Wood Johnson Med Sch, Dept Biochem, Howard Hughes Med Inst, Div Nucl Acids Enzymol, Piscataway, NJ 08854 USA

Gamblin, SJ
论文数: 0 引用数: 0
h-index: 0
机构: Robert Wood Johnson Med Sch, Dept Biochem, Howard Hughes Med Inst, Div Nucl Acids Enzymol, Piscataway, NJ 08854 USA

Barlev, NA
论文数: 0 引用数: 0
h-index: 0
机构:
Robert Wood Johnson Med Sch, Dept Biochem, Howard Hughes Med Inst, Div Nucl Acids Enzymol, Piscataway, NJ 08854 USA Robert Wood Johnson Med Sch, Dept Biochem, Howard Hughes Med Inst, Div Nucl Acids Enzymol, Piscataway, NJ 08854 USA

Reinberg, D
论文数: 0 引用数: 0
h-index: 0
机构: Robert Wood Johnson Med Sch, Dept Biochem, Howard Hughes Med Inst, Div Nucl Acids Enzymol, Piscataway, NJ 08854 USA
[3]
Posttranslational hydroxylation of ankyrin repeats in IκB proteins by the hypoxia-inducible factor (HIF) asparaginyl hydroxylase, factor inhibiting HIF (FIH)
[J].
Cockman, Matthew E.
;
Lancaster, David E.
;
Stolze, Ineke P.
;
Hewitson, Kirsty S.
;
McDonough, Michael A.
;
Coleman, Mathew L.
;
Coles, Charlotte H.
;
Yu, Xiaohong
;
Hay, Ronald T.
;
Ley, Steven C.
;
Pugh, Christopher W.
;
Oldham, Neil J.
;
Masson, Norma
;
Schofield, Christopher J.
;
Ratcliffe, Peter J.
.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA,
2006, 103 (40)
:14767-14772

Cockman, Matthew E.
论文数: 0 引用数: 0
h-index: 0
机构: Univ Oxford, Henry Wellcome Bldg Mol Physiol, Oxford OX3 7BN, England

Lancaster, David E.
论文数: 0 引用数: 0
h-index: 0
机构: Univ Oxford, Henry Wellcome Bldg Mol Physiol, Oxford OX3 7BN, England

Stolze, Ineke P.
论文数: 0 引用数: 0
h-index: 0
机构: Univ Oxford, Henry Wellcome Bldg Mol Physiol, Oxford OX3 7BN, England

Hewitson, Kirsty S.
论文数: 0 引用数: 0
h-index: 0
机构: Univ Oxford, Henry Wellcome Bldg Mol Physiol, Oxford OX3 7BN, England

McDonough, Michael A.
论文数: 0 引用数: 0
h-index: 0
机构: Univ Oxford, Henry Wellcome Bldg Mol Physiol, Oxford OX3 7BN, England

Coleman, Mathew L.
论文数: 0 引用数: 0
h-index: 0
机构: Univ Oxford, Henry Wellcome Bldg Mol Physiol, Oxford OX3 7BN, England

Coles, Charlotte H.
论文数: 0 引用数: 0
h-index: 0
机构: Univ Oxford, Henry Wellcome Bldg Mol Physiol, Oxford OX3 7BN, England

Yu, Xiaohong
论文数: 0 引用数: 0
h-index: 0
机构: Univ Oxford, Henry Wellcome Bldg Mol Physiol, Oxford OX3 7BN, England

Hay, Ronald T.
论文数: 0 引用数: 0
h-index: 0
机构: Univ Oxford, Henry Wellcome Bldg Mol Physiol, Oxford OX3 7BN, England

Ley, Steven C.
论文数: 0 引用数: 0
h-index: 0
机构: Univ Oxford, Henry Wellcome Bldg Mol Physiol, Oxford OX3 7BN, England

Pugh, Christopher W.
论文数: 0 引用数: 0
h-index: 0
机构: Univ Oxford, Henry Wellcome Bldg Mol Physiol, Oxford OX3 7BN, England

Oldham, Neil J.
论文数: 0 引用数: 0
h-index: 0
机构: Univ Oxford, Henry Wellcome Bldg Mol Physiol, Oxford OX3 7BN, England

Masson, Norma
论文数: 0 引用数: 0
h-index: 0
机构: Univ Oxford, Henry Wellcome Bldg Mol Physiol, Oxford OX3 7BN, England

Schofield, Christopher J.
论文数: 0 引用数: 0
h-index: 0
机构: Univ Oxford, Henry Wellcome Bldg Mol Physiol, Oxford OX3 7BN, England

Ratcliffe, Peter J.
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Oxford, Henry Wellcome Bldg Mol Physiol, Oxford OX3 7BN, England Univ Oxford, Henry Wellcome Bldg Mol Physiol, Oxford OX3 7BN, England
[4]
Asparaginyl hydroxylation of the notch ankyrin repeat domain by factor inhibiting hypoxia-inducible factor
[J].
Coleman, Mathew L.
;
McDonough, Michael A.
;
Hewitson, Kirsty S.
;
Coles, Charlotte
;
Mecinovic, Jasmin
;
Edelmann, Mariola
;
Cook, Kristina M.
;
Cockman, Matthew E.
;
Lancaster, David E.
;
Kessler, Benedikt M.
;
Oldham, Neil J.
;
Ratcliffe, Peter J.
;
Schofield, Christopher J.
.
JOURNAL OF BIOLOGICAL CHEMISTRY,
2007, 282 (33)
:24027-24038

Coleman, Mathew L.
论文数: 0 引用数: 0
h-index: 0
机构: Univ Oxford, Chem Res Lab, Oxford OX1 3TA, England

McDonough, Michael A.
论文数: 0 引用数: 0
h-index: 0
机构: Univ Oxford, Chem Res Lab, Oxford OX1 3TA, England

Hewitson, Kirsty S.
论文数: 0 引用数: 0
h-index: 0
机构: Univ Oxford, Chem Res Lab, Oxford OX1 3TA, England

Coles, Charlotte
论文数: 0 引用数: 0
h-index: 0
机构: Univ Oxford, Chem Res Lab, Oxford OX1 3TA, England

Mecinovic, Jasmin
论文数: 0 引用数: 0
h-index: 0
机构: Univ Oxford, Chem Res Lab, Oxford OX1 3TA, England

Edelmann, Mariola
论文数: 0 引用数: 0
h-index: 0
机构: Univ Oxford, Chem Res Lab, Oxford OX1 3TA, England

Cook, Kristina M.
论文数: 0 引用数: 0
h-index: 0
机构: Univ Oxford, Chem Res Lab, Oxford OX1 3TA, England

Cockman, Matthew E.
论文数: 0 引用数: 0
h-index: 0
机构: Univ Oxford, Chem Res Lab, Oxford OX1 3TA, England

Lancaster, David E.
论文数: 0 引用数: 0
h-index: 0
机构: Univ Oxford, Chem Res Lab, Oxford OX1 3TA, England

Kessler, Benedikt M.
论文数: 0 引用数: 0
h-index: 0
机构: Univ Oxford, Chem Res Lab, Oxford OX1 3TA, England

Oldham, Neil J.
论文数: 0 引用数: 0
h-index: 0
机构: Univ Oxford, Chem Res Lab, Oxford OX1 3TA, England

论文数: 引用数:
h-index:
机构:

Schofield, Christopher J.
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Oxford, Chem Res Lab, Oxford OX1 3TA, England Univ Oxford, Chem Res Lab, Oxford OX1 3TA, England
[5]
Structural and functional analysis of SET8, a histone H4 Lys-20 methyltransferase
[J].
Couture, JF
;
Collazo, E
;
Brunzelle, JS
;
Trievel, RC
.
GENES & DEVELOPMENT,
2005, 19 (12)
:1455-1465

Couture, JF
论文数: 0 引用数: 0
h-index: 0
机构: Univ Michigan, Dept Biol Chem, Ann Arbor, MI 48109 USA

Collazo, E
论文数: 0 引用数: 0
h-index: 0
机构: Univ Michigan, Dept Biol Chem, Ann Arbor, MI 48109 USA

Brunzelle, JS
论文数: 0 引用数: 0
h-index: 0
机构: Univ Michigan, Dept Biol Chem, Ann Arbor, MI 48109 USA

Trievel, RC
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Michigan, Dept Biol Chem, Ann Arbor, MI 48109 USA Univ Michigan, Dept Biol Chem, Ann Arbor, MI 48109 USA
[6]
A methylation and phosphorylation switch between an adjacent lysine and serine determines human DNMT1 stability
[J].
Esteve, Pierre-Olivier
;
Chang, Yanqi
;
Samaranayake, Mala
;
Upadhyay, Anup K.
;
Horton, John R.
;
Feehery, George R.
;
Cheng, Xiaodong
;
Pradhan, Sriharsa
.
NATURE STRUCTURAL & MOLECULAR BIOLOGY,
2011, 18 (01)
:42-+

Esteve, Pierre-Olivier
论文数: 0 引用数: 0
h-index: 0
机构:
New England Biolabs Inc, Ipswich, MA USA New England Biolabs Inc, Ipswich, MA USA

Chang, Yanqi
论文数: 0 引用数: 0
h-index: 0
机构:
Emory Univ, Sch Med, Dept Biochem, Atlanta, GA 30322 USA New England Biolabs Inc, Ipswich, MA USA

Samaranayake, Mala
论文数: 0 引用数: 0
h-index: 0
机构:
New England Biolabs Inc, Ipswich, MA USA New England Biolabs Inc, Ipswich, MA USA

Upadhyay, Anup K.
论文数: 0 引用数: 0
h-index: 0
机构:
Emory Univ, Sch Med, Dept Biochem, Atlanta, GA 30322 USA New England Biolabs Inc, Ipswich, MA USA

Horton, John R.
论文数: 0 引用数: 0
h-index: 0
机构:
Emory Univ, Sch Med, Dept Biochem, Atlanta, GA 30322 USA New England Biolabs Inc, Ipswich, MA USA

Feehery, George R.
论文数: 0 引用数: 0
h-index: 0
机构:
New England Biolabs Inc, Ipswich, MA USA New England Biolabs Inc, Ipswich, MA USA

Cheng, Xiaodong
论文数: 0 引用数: 0
h-index: 0
机构:
Emory Univ, Sch Med, Dept Biochem, Atlanta, GA 30322 USA New England Biolabs Inc, Ipswich, MA USA

Pradhan, Sriharsa
论文数: 0 引用数: 0
h-index: 0
机构:
New England Biolabs Inc, Ipswich, MA USA New England Biolabs Inc, Ipswich, MA USA
[7]
Role for 53BP1 Tudor Domain Recognition of p53 Dimethylated at Lysine 382 in DNA Damage Signaling
[J].
Kachirskaia, Ioulia
;
Shi, Xiaobing
;
Yamaguchi, Hiroshi
;
Tanoue, Kan
;
Wen, Hong
;
Wang, Evelyn W.
;
Appella, Ettore
;
Gozani, Or
.
JOURNAL OF BIOLOGICAL CHEMISTRY,
2008, 283 (50)
:34660-34666

Kachirskaia, Ioulia
论文数: 0 引用数: 0
h-index: 0
机构:
Stanford Univ, Dept Biol, Stanford, CA 94305 USA Stanford Univ, Dept Biol, Stanford, CA 94305 USA

Shi, Xiaobing
论文数: 0 引用数: 0
h-index: 0
机构:
Stanford Univ, Dept Biol, Stanford, CA 94305 USA Stanford Univ, Dept Biol, Stanford, CA 94305 USA

Yamaguchi, Hiroshi
论文数: 0 引用数: 0
h-index: 0
机构:
NCI, Cell Biol Lab, NIH, Bethesda, MD 20892 USA Stanford Univ, Dept Biol, Stanford, CA 94305 USA

Tanoue, Kan
论文数: 0 引用数: 0
h-index: 0
机构:
NCI, Cell Biol Lab, NIH, Bethesda, MD 20892 USA Stanford Univ, Dept Biol, Stanford, CA 94305 USA

Wen, Hong
论文数: 0 引用数: 0
h-index: 0
机构:
Stanford Univ, Sch Med, Dept Pathol, Stanford, CA 94305 USA Stanford Univ, Dept Biol, Stanford, CA 94305 USA

Wang, Evelyn W.
论文数: 0 引用数: 0
h-index: 0
机构:
Stanford Univ, Sch Med, Dept Pathol, Stanford, CA 94305 USA Stanford Univ, Dept Biol, Stanford, CA 94305 USA

Appella, Ettore
论文数: 0 引用数: 0
h-index: 0
机构:
NCI, Cell Biol Lab, NIH, Bethesda, MD 20892 USA Stanford Univ, Dept Biol, Stanford, CA 94305 USA

Gozani, Or
论文数: 0 引用数: 0
h-index: 0
机构:
Stanford Univ, Dept Biol, Stanford, CA 94305 USA Stanford Univ, Dept Biol, Stanford, CA 94305 USA
[8]
JmjC-domain-containing proteins and histone demethylation
[J].
Klose, Robert J.
;
Kallin, Eric M.
;
Zhang, Yi
.
NATURE REVIEWS GENETICS,
2006, 7 (09)
:715-727

Klose, Robert J.
论文数: 0 引用数: 0
h-index: 0
机构:
Univ N Carolina, Dept Biochem & Biophys, Howard Hughes Med Inst, Lineberger Comprehens Canc Ctr, Chapel Hill, NC 27599 USA Univ N Carolina, Dept Biochem & Biophys, Howard Hughes Med Inst, Lineberger Comprehens Canc Ctr, Chapel Hill, NC 27599 USA

Kallin, Eric M.
论文数: 0 引用数: 0
h-index: 0
机构:
Univ N Carolina, Dept Biochem & Biophys, Howard Hughes Med Inst, Lineberger Comprehens Canc Ctr, Chapel Hill, NC 27599 USA Univ N Carolina, Dept Biochem & Biophys, Howard Hughes Med Inst, Lineberger Comprehens Canc Ctr, Chapel Hill, NC 27599 USA

Zhang, Yi
论文数: 0 引用数: 0
h-index: 0
机构:
Univ N Carolina, Dept Biochem & Biophys, Howard Hughes Med Inst, Lineberger Comprehens Canc Ctr, Chapel Hill, NC 27599 USA Univ N Carolina, Dept Biochem & Biophys, Howard Hughes Med Inst, Lineberger Comprehens Canc Ctr, Chapel Hill, NC 27599 USA
[9]
The transcriptional repressor JHDM3A demethylates trimethyl histone H3 lysine 9 and lysine 36
[J].
Klose, Robert J.
;
Yamane, Kenichi
;
Bae, Yangjin
;
Zhang, Dianzheng
;
Erdjument-Bromage, Hediye
;
Tempst, Paul
;
Wong, Jiemin
;
Zhang, Yi
.
NATURE,
2006, 442 (7100)
:312-316

Klose, Robert J.
论文数: 0 引用数: 0
h-index: 0
机构: Univ N Carolina, Howard Hughes Med Inst, Chapel Hill, NC 27599 USA

Yamane, Kenichi
论文数: 0 引用数: 0
h-index: 0
机构: Univ N Carolina, Howard Hughes Med Inst, Chapel Hill, NC 27599 USA

Bae, Yangjin
论文数: 0 引用数: 0
h-index: 0
机构: Univ N Carolina, Howard Hughes Med Inst, Chapel Hill, NC 27599 USA

Zhang, Dianzheng
论文数: 0 引用数: 0
h-index: 0
机构: Univ N Carolina, Howard Hughes Med Inst, Chapel Hill, NC 27599 USA

Erdjument-Bromage, Hediye
论文数: 0 引用数: 0
h-index: 0
机构: Univ N Carolina, Howard Hughes Med Inst, Chapel Hill, NC 27599 USA

Tempst, Paul
论文数: 0 引用数: 0
h-index: 0
机构: Univ N Carolina, Howard Hughes Med Inst, Chapel Hill, NC 27599 USA

Wong, Jiemin
论文数: 0 引用数: 0
h-index: 0
机构: Univ N Carolina, Howard Hughes Med Inst, Chapel Hill, NC 27599 USA

Zhang, Yi
论文数: 0 引用数: 0
h-index: 0
机构:
Univ N Carolina, Howard Hughes Med Inst, Chapel Hill, NC 27599 USA Univ N Carolina, Howard Hughes Med Inst, Chapel Hill, NC 27599 USA
[10]
Chromatin modifications and their function
[J].
Kouzarides, Tony
.
CELL,
2007, 128 (04)
:693-705

Kouzarides, Tony
论文数: 0 引用数: 0
h-index: 0
机构: Univ Cambridge, Gurdon Inst, Cambridge CB2 1QN, England