Studies on substrate specificity of Jmjd2a-c histone demethylases

被引:10
作者
Ponnaluri, V. K. Chaithanya [1 ]
Vavilala, Divya Teja [1 ]
Mukherji, Mridul [1 ]
机构
[1] Univ Missouri, Div Pharmaceut Sci, Sch Pharm, Kansas City, MO 64108 USA
关键词
Epigenetics; Demethylase; Dioxygenase; Enzyme assay; Transcription regulation; Jumonji domain; PHYTANOYL-COA; 2-HYDROXYLASE; HYPOXIA-INDUCIBLE FACTOR; LYSINE METHYLTRANSFERASE; KAPPA-B; DOMAIN; METHYLATION; PROTEIN; H3; HYDROXYLATION; RECOGNITION;
D O I
10.1016/j.bbrc.2011.01.073
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Jumonji domain containing iron (II), 2-oxoglutarate (2OG)-dependent dioxygenases from Jmjd2 family demethylate trimethylated histone3-lysine 9 (H3-K9me3), and also H3-K9me2 and H3-K36me3, albeit at lower rates. Recently, we have identified the first non-histone substrates of JmjD2 demethylases. Here, we studied the substrate specificity of Jmjd2a-c demethylases using site-directed mutagenesis and novel non-histone substrates. We identified preference of Arg at -1 position and a smaller amino acid at -2 position using both singly and doubly mutated peptide substrates by Jmjd2a-c demethylases. Our results also identified similarities in substrate selectivity by H3-K9 methyltransferase, G9a and Jmjd2 demethylases despite their distinct reaction mechanisms. Published by Elsevier Inc.
引用
收藏
页码:588 / 592
页数:5
相关论文
共 30 条
  • [1] Lysine Acetylation Targets Protein Complexes and Co-Regulates Major Cellular Functions
    Choudhary, Chunaram
    Kumar, Chanchal
    Gnad, Florian
    Nielsen, Michael L.
    Rehman, Michael
    Walther, Tobias C.
    Olsen, Jesper V.
    Mann, Matthias
    [J]. SCIENCE, 2009, 325 (5942) : 834 - 840
  • [2] Regulation of p53 activity through lysine methylation
    Chuikov, S
    Kurash, JK
    Wilson, JR
    Xiao, B
    Justin, N
    Ivanov, GS
    McKinney, K
    Tempst, P
    Prives, C
    Gamblin, SJ
    Barlev, NA
    Reinberg, D
    [J]. NATURE, 2004, 432 (7015) : 353 - 360
  • [3] Posttranslational hydroxylation of ankyrin repeats in IκB proteins by the hypoxia-inducible factor (HIF) asparaginyl hydroxylase, factor inhibiting HIF (FIH)
    Cockman, Matthew E.
    Lancaster, David E.
    Stolze, Ineke P.
    Hewitson, Kirsty S.
    McDonough, Michael A.
    Coleman, Mathew L.
    Coles, Charlotte H.
    Yu, Xiaohong
    Hay, Ronald T.
    Ley, Steven C.
    Pugh, Christopher W.
    Oldham, Neil J.
    Masson, Norma
    Schofield, Christopher J.
    Ratcliffe, Peter J.
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2006, 103 (40) : 14767 - 14772
  • [4] Asparaginyl hydroxylation of the notch ankyrin repeat domain by factor inhibiting hypoxia-inducible factor
    Coleman, Mathew L.
    McDonough, Michael A.
    Hewitson, Kirsty S.
    Coles, Charlotte
    Mecinovic, Jasmin
    Edelmann, Mariola
    Cook, Kristina M.
    Cockman, Matthew E.
    Lancaster, David E.
    Kessler, Benedikt M.
    Oldham, Neil J.
    Ratcliffe, Peter J.
    Schofield, Christopher J.
    [J]. JOURNAL OF BIOLOGICAL CHEMISTRY, 2007, 282 (33) : 24027 - 24038
  • [5] Structural and functional analysis of SET8, a histone H4 Lys-20 methyltransferase
    Couture, JF
    Collazo, E
    Brunzelle, JS
    Trievel, RC
    [J]. GENES & DEVELOPMENT, 2005, 19 (12) : 1455 - 1465
  • [6] A methylation and phosphorylation switch between an adjacent lysine and serine determines human DNMT1 stability
    Esteve, Pierre-Olivier
    Chang, Yanqi
    Samaranayake, Mala
    Upadhyay, Anup K.
    Horton, John R.
    Feehery, George R.
    Cheng, Xiaodong
    Pradhan, Sriharsa
    [J]. NATURE STRUCTURAL & MOLECULAR BIOLOGY, 2011, 18 (01) : 42 - +
  • [7] Role for 53BP1 Tudor Domain Recognition of p53 Dimethylated at Lysine 382 in DNA Damage Signaling
    Kachirskaia, Ioulia
    Shi, Xiaobing
    Yamaguchi, Hiroshi
    Tanoue, Kan
    Wen, Hong
    Wang, Evelyn W.
    Appella, Ettore
    Gozani, Or
    [J]. JOURNAL OF BIOLOGICAL CHEMISTRY, 2008, 283 (50) : 34660 - 34666
  • [8] JmjC-domain-containing proteins and histone demethylation
    Klose, Robert J.
    Kallin, Eric M.
    Zhang, Yi
    [J]. NATURE REVIEWS GENETICS, 2006, 7 (09) : 715 - 727
  • [9] The transcriptional repressor JHDM3A demethylates trimethyl histone H3 lysine 9 and lysine 36
    Klose, Robert J.
    Yamane, Kenichi
    Bae, Yangjin
    Zhang, Dianzheng
    Erdjument-Bromage, Hediye
    Tempst, Paul
    Wong, Jiemin
    Zhang, Yi
    [J]. NATURE, 2006, 442 (7100) : 312 - 316
  • [10] Chromatin modifications and their function
    Kouzarides, Tony
    [J]. CELL, 2007, 128 (04) : 693 - 705