Selective quantification of human DNA by real-time PCR of FOXP2

被引:8
作者
Soejima, Mikiko [1 ]
Hiroshige, Kenichi [1 ,2 ]
Yoshimoto, Joji [1 ]
Koda, Yoshiro [1 ]
机构
[1] Kurume Univ, Sch Med, Dept Forens Med & Human Genet, Kurume, Fukuoka 8300011, Japan
[2] Fukuoka Prefectural Police Headquarters, Forens Sci Lab, Hakata Ku, Fukuoka 8128576, Japan
基金
日本学术振兴会;
关键词
Real-time PCR; Human identification; Quantification of DNA; TaqMan; POLYMERASE-CHAIN-REACTION; DEVELOPMENTAL VALIDATION; EVOLUTION; NUCLEAR;
D O I
10.1016/j.fsigen.2011.09.006
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
We established a simple quantitative PCR procedure with high specificity and sensitivity using TaqMan probes targeting the FOXP2 sequence. This assay distinguished human and nonhuman, including primates, samples with the exception of mouse, turtle, lizard, and fishes. However, the specific amplification of mouse, lizard, and turtle fragments of FOXP2 could be confirmed by electrophoresis after real-time PCR. Because the C-T values obtained for human DNA were not affected by contaminating animal DNA at concentrations up to 30 times that of human DNA, we were able to estimate the concentration of human DNA in mixed specimens. This assay provides a reliable and useful method for routine quantification of human-specific DNA in forensic practice. (C) 2011 Elsevier Ireland Ltd. All rights reserved.
引用
收藏
页码:447 / 451
页数:5
相关论文
共 50 条
  • [21] Clinical Predictive Value of Real-Time PCR Quantification of Human Cytomegalovirus DNA in Amniotic Fluid Samples
    Goegebuer, T.
    Van Meensel, B.
    Beuselinck, K.
    Cossey, V.
    Van Ranst, M.
    Hanssens, M.
    Lagrou, K.
    JOURNAL OF CLINICAL MICROBIOLOGY, 2009, 47 (03) : 660 - 665
  • [22] Detection and quantification of hepatopancreatic parvovirus in penaeid shrimp by real-time PCR assay
    Liu, Tianqi
    Yang, Bing
    Song, Xiaoling
    Wang, Xiuhua
    Yuan, Yanyan
    Liu, Li
    Huang, Jie
    JOURNAL OF INVERTEBRATE PATHOLOGY, 2013, 114 (03) : 309 - 312
  • [23] Comparison of droplet digital PCR to real-time PCR for quantification of hepatitis B virus DNA
    Tang, Hui
    Cai, Qingchun
    Li, Hu
    Hu, Peng
    BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY, 2016, 80 (11) : 2159 - 2164
  • [24] LNA real-time PCR probe quantification of hepatitis B virus DNA
    Wang, Qing
    Wang, Xueqian
    Zhang, Junhua
    Song, Guanghui
    EXPERIMENTAL AND THERAPEUTIC MEDICINE, 2012, 3 (03) : 503 - 508
  • [25] Real-time PCR for quantification of Streptococcus mutans
    Yano, A
    Kaneko, N
    Ida, H
    Yamaguchi, T
    Hanada, N
    FEMS MICROBIOLOGY LETTERS, 2002, 217 (01) : 23 - 30
  • [26] A versatile internal control for use as DNA in real-time PCR and as RNA in real-time reverse transcription PCR assays
    Deer, D. M.
    Lampel, K. A.
    Gonzalez-Escalona, N.
    LETTERS IN APPLIED MICROBIOLOGY, 2010, 50 (04) : 366 - 372
  • [27] Detection and semi-quantification of Strongylus vulgaris DNA in equine faeces by real-time quantitative PCR
    Nielsen, Martin K.
    Peterson, David S.
    Monrad, Jesper
    Tharnsborg, Stig M.
    Olsen, Susanne N.
    Kaplan, Ray M.
    INTERNATIONAL JOURNAL FOR PARASITOLOGY, 2008, 38 (3-4) : 443 - 453
  • [28] Comparison of gene nature used in real-time PCR for porcine identification and quantification: A review
    Mohamad, Nurhidayatul Asma
    El Sheikha, Aly Farag
    Mustafa, Shuhaimi
    Mokhtar, Nur Fadhilah Khairil
    FOOD RESEARCH INTERNATIONAL, 2013, 50 (01) : 330 - 338
  • [29] Comparisons between capillary zone electrophoresis and real-time PCR for quantification of circulating DNA levels in human sera
    Sang, Fuming
    Ren, Jicun
    JOURNAL OF CHROMATOGRAPHY B-ANALYTICAL TECHNOLOGIES IN THE BIOMEDICAL AND LIFE SCIENCES, 2006, 838 (02): : 122 - 128
  • [30] Quantification of human astroviruses in sewage using real-time RT-PCR
    Le Cann, P
    Ranarijaona, S
    Monpoeho, S
    Le Guyader, F
    Ferré, V
    RESEARCH IN MICROBIOLOGY, 2004, 155 (01) : 11 - 15