H3K79me2/3 controls enhancer-promoter interactions and activation of the pan-cancer stem cell marker PROM1/CD133 in MLL-AF4 leukemia cells

被引:40
|
作者
Godfrey, Laura [1 ]
Crump, Nicholas T. [1 ]
O'Byrne, Sorcha [2 ]
Lau, I-Jun [1 ]
Rice, Siobhan [1 ]
Harman, Joe R. [1 ]
Jackson, Thomas [2 ]
Elliott, Natalina [2 ]
Buck, Gemma [2 ]
Connor, Christopher [3 ]
Thorne, Ross [1 ]
Knapp, David J. H. F. [4 ]
Heidenreich, Olaf [5 ,6 ]
Vyas, Paresh [1 ,7 ]
Menendez, Pablo [8 ,9 ,10 ]
Inglott, Sarah [3 ]
Ancliff, Philip [3 ]
Geng, Huimin [11 ]
Roberts, Irene [1 ,2 ]
Roy, Anindita [2 ]
Milne, Thomas A. [1 ]
机构
[1] Univ Oxford, MRC Mol Haematol Unit, MRC Weatherall Inst Mol Med, NIHR Oxford Biomed Res Ctr Haematol Theme, Oxford, England
[2] Univ Oxford, Dept Paediat, Oxford, England
[3] Great Ormond St Hosp Sick Children, London, England
[4] Univ Oxford, Radcliffe Dept Med, MRC Weatherall Inst Mol Med, Oxford, England
[5] Princess Maxima Ctr Pediat Oncol, Utrecht, Netherlands
[6] Newcastle Univ, Wolfson Childhood Canc Res Ctr, Newcastle Upon Tyne, Tyne & Wear, England
[7] Oxford Univ Hosp NHS Fdn Trust, Dept Haematol, Oxford, England
[8] Josep Carreras Leukemia Res Inst, Barcelona, Spain
[9] ICREA, Barcelona, Spain
[10] Ctr Invest Biomed Red Canc CIBERONC ISCIII, Barcelona, Spain
[11] Univ Calif San Francisco, Dept Lab Med, San Francisco, CA 94143 USA
基金
英国惠康基金; 欧洲研究理事会; 英国医学研究理事会;
关键词
ACUTE LYMPHOBLASTIC-LEUKEMIA; EXPRESSION ANALYSIS; PROGNOSTIC MARKERS; FUSION PROTEIN; CHROMATIN; CD133; LINE; METHYLATION; SENSITIVITY; POLYCOMB;
D O I
10.1038/s41375-020-0808-y
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
MLL gene rearrangements (MLLr) are a common cause of aggressive, incurable acute lymphoblastic leukemias (ALL) in infants and children, most of which originate in utero. The most common MLLr produces an MLL-AF4 fusion protein. MLL-AF4 promotes leukemogenesis by activating key target genes, mainly through recruitment of DOT1L and increased histone H3 lysine-79 methylation (H3K79me2/3). One key MLL-AF4 target gene is PROM1, which encodes CD133 (Prominin-1). CD133 is a pentaspan transmembrane glycoprotein that represents a potential pan-cancer target as it is found on multiple cancer stem cells. Here we demonstrate that aberrant PROM1/CD133 expression is essential for leukemic cell growth, mediated by direct binding of MLL-AF4. Activation is controlled by an intragenic H3K79me2/3 enhancer element (KEE) leading to increased enhancer-promoter interactions between PROM1 and the nearby gene TAPT1. This dual locus regulation is reflected in a strong correlation of expression in leukemia. We find that in PROM1/CD133 non-expressing cells, the PROM1 locus is repressed by polycomb repressive complex 2 (PRC2) binding, associated with reduced expression of TAPT1, partially due to loss of interactions with the PROM1 locus. Together, these results provide the first detailed analysis of PROM1/CD133 regulation that explains CD133 expression in MLLr ALL.
引用
收藏
页码:90 / 106
页数:17
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