Extending the Supramolecular Synthon Based Fragment Approach (SBFA) for Transferability of Multipole Charge Density Parameters to Monofluorobenzoic Acids and their Cocrystals with Isonicotinamide: Importance of C-H•••O, C-H•••F, and F•••F Intermolecular Regions

被引:57
作者
Hathwar, Venkatesha R. [1 ]
Thakur, Tejender S. [1 ]
Dubey, Ritesh [1 ]
Pavan, Mysore S. [1 ]
Row, Tayur N. Guru [1 ]
Desiraju, Gautam R. [1 ]
机构
[1] Indian Inst Sci, Solid State & Struct Chem Unit, Bangalore 560012, Karnataka, India
关键词
ELECTROSTATIC INTERACTION ENERGY; RAY-DIFFRACTION DATA; ATOM DATA-BANK; X-RAY; HYDROGEN-BONDS; AGOSTIC INTERACTIONS; ANISOTROPIC ATOM; LATTICE ENERGIES; SMALL-MOLECULE; WAVE-FUNCTIONS;
D O I
10.1021/jp2039866
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
An extension of the supramolecular synthon-based fragment approach (SBFA) method for transferability of multipole charge density parameters to include weak supramolecular synthons is proposed. In particular, the SBFA method is applied to C-H center dot center dot center dot O, C-H center dot center dot center dot F, and F center dot center dot center dot F containing synthons. A high resolution charge density study has been performed on 4-fluorobenzoic acid to build a synthon library for C-H center dot center dot center dot F infinite chain interactions. Libraries for C-H center dot center dot center dot O and F center dot center dot center dot F synthons were taken from earlier work. The SBFA methodology was applied successfully to 2- and 3-fluorobenzoic acids, data sets for which were collected in a routine manner at 100 K, and the modularity of the synthons was demonstrated. Cocrystals of isonicotinamide with all three fluorobenzoic acids were also studied with the SBFA method. The topological analysis of inter- and intramolecular interaction regions was performed using Bader's AIM approach. This study shows that the SBFA method is generally applicable to generate charge density maps using information from multiple intermolecular regions.
引用
收藏
页码:12852 / 12863
页数:12
相关论文
共 78 条
[1]   Heteromeric intermolecular interactions as synthetic tools for the formation of binary co-crystals [J].
Aakeröy, CB ;
Desper, J ;
Helfrich, BA .
CRYSTENGCOMM, 2004, 6 :19-24
[2]   Use of X-ray charge densities in the calculation of intermolecular interactions and lattice energies: Application to glycylglycine, dl-histidine, and dl-proline and comparison with theory [J].
Abramov, YA ;
Volkov, A ;
Wu, G ;
Coppens, P .
JOURNAL OF PHYSICAL CHEMISTRY B, 2000, 104 (09) :2183-2188
[3]   Anisotropic atom-atom potentials from X-ray charge densities: application to intermolecular interactions and lattice energies in some biological and nonlinear optical materials [J].
Abramov, YA ;
Volkov, A ;
Coppens, P .
JOURNAL OF MOLECULAR STRUCTURE-THEOCHEM, 2000, 529 :27-35
[4]   A SYSTEMATIC PAIRWISE COMPARISON OF GEOMETRIC PARAMETERS OBTAINED BY X-RAY AND NEUTRON-DIFFRACTION [J].
ALLEN, FH .
ACTA CRYSTALLOGRAPHICA SECTION B-STRUCTURAL SCIENCE, 1986, 42 :515-522
[5]   The Cambridge Structural Database: a quarter of a million crystal structures and rising [J].
Allen, FH .
ACTA CRYSTALLOGRAPHICA SECTION B-STRUCTURAL SCIENCE, 2002, 58 (3 PART 1) :380-388
[6]  
[Anonymous], 2009, CRYSTALCLEAR 2 0
[7]   Metal-bound chlorine often accepts hydrogen bonds [J].
Aullón, G ;
Bellamy, D ;
Brammer, L ;
Bruton, EA ;
Orpen, AG .
CHEMICAL COMMUNICATIONS, 1998, (06) :653-654
[8]   Charge density and topological analysis of pentafluorobenzoic acid [J].
Bach, A ;
Lentz, D ;
Luger, P .
JOURNAL OF PHYSICAL CHEMISTRY A, 2001, 105 (31) :7405-7412
[9]  
Bader R. F. W., 1994, ATOMS MOL QUANTUM TH
[10]   A bond path: A universal indicator of bonded interactions [J].
Bader, RFW .
JOURNAL OF PHYSICAL CHEMISTRY A, 1998, 102 (37) :7314-7323