A Morphing [4Fe-3S-nO]-Cluster within a Carbon Monoxide Dehydrogenase Scaffold

被引:4
作者
Jeoung, Jae-Hun [1 ]
Fesseler, Jochen [1 ]
Domnik, Lilith [1 ]
Klemke, Friederike [1 ]
Sinnreich, Malte [2 ]
Teutloff, Christian [2 ]
Dobbek, Holger [1 ]
机构
[1] Humboldt Univ, Inst Biol, Unter Linden 6, D-10099 Berlin, Germany
[2] Free Univ Berlin, Fachbereich Phys, Arnimallee 14, D-14195 Berlin, Germany
关键词
CODH Evolution; Enzymes; Hydroxylamine Reduction; Iron-Sulfur-Oxo Cluster; Structural Biology; HYBRID-CLUSTER PROTEIN; DESULFOVIBRIO-VULGARIS HILDENBOROUGH; X-RAY STRUCTURES; DESULFURICANS ATCC-27774; CO DEHYDROGENASE; PRISMANE PROTEIN; ESCHERICHIA-COLI; EPR SPECTROSCOPY; HCP; ANGSTROM;
D O I
10.1002/anie.202117000
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Ni,Fe-containing carbon monoxide dehydrogenases (CODHs) catalyze the reversible reduction of CO2 to CO. Several anaerobic microorganisms encode multiple CODHs in their genome, of which some, despite being annotated as CODHs, lack a cysteine of the canonical binding motif for the active site Ni,Fe-cluster. Here, we report on the structure and reactivity of such a deviant enzyme, termed CooS-V-Ch. Its structure reveals the typical CODH scaffold, but contains an iron-sulfur-oxo hybrid-cluster. Although closely related to true CODHs, CooS-V-Ch catalyzes neither CO oxidation, nor CO2 reduction. The active site of CooS-V-Ch undergoes a redox-dependent restructuring between a reduced [4Fe-3S]-cluster and an oxidized [4Fe-2S-S*-2O-2(H2O)]-cluster. Hydroxylamine, a slow-turnover substrate of CooS-V-Ch, oxidizes the hybrid-cluster in two structurally distinct steps. Overall, minor changes in CODHs are sufficient to accommodate a Fe/S/O-cluster in place of the Ni,Fe-heterocubane-cluster of CODHs.
引用
收藏
页数:8
相关论文
共 50 条
  • [21] P+ State of Nitrogenase P-Cluster Exhibits Electronic Structure of a [Fe4S4]+ Cluster
    Rupnik, Kresimir
    Hu, Yilin
    Lee, Chi Chung
    Wiig, Jared A.
    Ribbe, Markus W.
    Hales, Brian J.
    JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2012, 134 (33) : 13749 - 13754
  • [22] n-Butyl isocyanide oxidation at the [NiFe4S4OHx] cluster of CO dehydrogenase
    Jae-Hun Jeoung
    Holger Dobbek
    JBIC Journal of Biological Inorganic Chemistry, 2012, 17 : 167 - 173
  • [23] n-Butyl isocyanide oxidation at the [NiFe4S4OHx] cluster of CO dehydrogenase
    Jeoung, Jae-Hun
    Dobbek, Holger
    JOURNAL OF BIOLOGICAL INORGANIC CHEMISTRY, 2012, 17 (02): : 167 - 173
  • [24] Iron Insertion at the Assembly Site of the ISCU Scaffold Protein Is a Conserved Process Initiating Fe-S Cluster Biosynthesis
    Srour, Batoul
    Gervason, Sylvain
    Hoock, Maren Hellen
    Monfort, Beata
    Want, Kristian
    Larkem, Djabir
    Trabelsi, Nadine
    Landrot, Gautier
    Zitolo, Andrea
    Fonda, Emiliano
    Etienne, Emilien
    Gerbaud, Guillaume
    Mueller, Christina Sophia
    Oltmanns, Jonathan
    Gordon, Jesse B.
    Yadav, Vishal
    Kleczewska, Malgorzata
    Jelen, Marcin
    Toledano, Michel B.
    Dutkiewicz, Rafal
    Goldberg, David P.
    Schuenemann, Volker
    Guigliarelli, Bruno
    Burlat, Benedicte
    Sizun, Christina
    D'Autreaux, Benoit
    JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2022, 144 (38) : 17496 - 17515
  • [25] A conserved motif liganding the [4Fe-4S] cluster in [4Fe-4S] fumarases prevents irreversible inactivation of the enzyme during hydrogen peroxide stress
    Lu, Zheng
    Imlay, James A.
    REDOX BIOLOGY, 2019, 26
  • [26] Characterization of [4Fe-4S]-Containing and Cluster-Free Forms of Streptomyces WhiD
    Crack, Jason C.
    den Hengst, Chris D.
    Jakimowicz, Piotr
    Subramanian, Sowmya
    Johnson, Michael K.
    Buttner, Mark J.
    Thomson, Andrew J.
    Le Brun, Nick E.
    BIOCHEMISTRY, 2009, 48 (51) : 12252 - 12264
  • [27] Nonredox thiolation in tRNA occurring via sulfur activation by a [4Fe-4S] cluster
    Arragain, Simon
    Bimai, Ornella
    Legrand, Pierre
    Caillat, Sylvain
    Ravanat, Jean-Luc
    Touati, Nadia
    Binet, Laurent
    Atta, Mohamed
    Fontecave, Marc
    Golinelli-Pimpaneau, Beatrice
    PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2017, 114 (28) : 7355 - 7360
  • [28] Mechanistic Insight into the Nitrosylation of the [4Fe-4S] Cluster of WhiB-like Proteins
    Crack, Jason C.
    Smith, Laura J.
    Stapleton, Melanie R.
    Peck, Jamie
    Watmough, Nicholas J.
    Buttner, Mark J.
    Buxton, Roger S.
    Green, Jeffrey
    Oganesyan, Vasily S.
    Thomson, Andrew J.
    Le Brun, Nick E.
    JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2011, 133 (04) : 1112 - 1121
  • [29] Design of specific inhibitors of quinolinate synthase based on [4Fe-4S] cluster coordination
    Cabodevilla, Jaione Saez
    Volbeda, Anne
    Hamelin, Olivier
    Latour, Jean-Marc
    Gigarel, Oceane
    Clemancey, Martin
    Darnault, Claudine
    Reichmann, Debora
    Amara, Patricia
    Fontecilla-Camps, Juan C.
    de Choudens, Sandrine Ollagnier
    CHEMICAL COMMUNICATIONS, 2019, 55 (26) : 3725 - 3728
  • [30] Dioxygen controls the nitrosylation reactions of a protein-bound [4Fe4S] cluster
    Grabarczyk, Daniel B.
    Ash, Philip A.
    Myers, William K.
    Dodd, Erin L.
    Vincent, Kylie A.
    DALTON TRANSACTIONS, 2019, 48 (37) : 13960 - 13970