Molecular phylogenetic analysis of Arenaria (Caryophyllaceae: tribe Arenarieae) and its allies inferred from nuclear DNA internal transcribed spacer and plastid DNArps16 sequences
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作者:
Sadeghian, Somayeh
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Univ Bu Ali Sina, Dept Biol, Fac Sci, Hamadan, IranUniv Bu Ali Sina, Dept Biol, Fac Sci, Hamadan, Iran
Sadeghian, Somayeh
[1
]
Zarre, Shahin
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Univ Tehran, Sch Biol, Coll Sci, Ctr Excellence Phylogeny Living Organisms, Tehran, Iran
Univ Tehran, Sch Biol, Coll Sci, Dept Plant Sci, Tehran, IranUniv Bu Ali Sina, Dept Biol, Fac Sci, Hamadan, Iran
Zarre, Shahin
[2
,3
]
Rabeler, Richard K.
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Univ Michigan Herbarium EEB, Ann Arbor, MI 48108 USAUniv Bu Ali Sina, Dept Biol, Fac Sci, Hamadan, Iran
Rabeler, Richard K.
[4
]
Heubl, Guenther
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Univ Munich, Dept Biol 1, Systemat Bot & Mycol, D-80638 Munich, Germany
Univ Munich, GeoBioctr, D-80638 Munich, GermanyUniv Bu Ali Sina, Dept Biol, Fac Sci, Hamadan, Iran
Heubl, Guenther
[5
,6
]
机构:
[1] Univ Bu Ali Sina, Dept Biol, Fac Sci, Hamadan, Iran
The systematics and phylogeny of the genus Arenaria and allied genera are unresolved. The use of morphological data has resulted in contradictory taxonomic concepts in the past due to their homoplastic nature. We present a phylogenetic analysis based on internal transcribed spacer (ITS) and rps16 sequence data of 140 (132 taxa) and 131 (120 taxa) accessions, respectively. Maximum parsimony and Bayesian analyses of each marker produced nearly congruent trees. Monophyly of Arenaria s.s. and Eremogone is confirmed here. Our results corroborate earlier results indicating that Arenaria subgenus Odontostemma is monophyletic, but outside the core group of Arenaria. Arenaria subgenus Solitaria is sister to Odontostemma and also not closely related to the latter; both of these subgenera are excluded from Arenaria and treated as distinct genera. The molecular data indicate that the Arenaria s.s. clade' consists of a few well-supported subgroups and that the current subgeneric classification of the genus does not reflect evolutionary history. Arenaria subgenus Leiosperma is clearly monophyletic, but we reduce it to sectional level. Our molecular data show that the monotypic Arenaria subgenera Porphyrantha and Arenariastrum are nested in A. subgenus Arenaria, whereas subgenus Eremogoneastrum is included in Eremogone. None of the species-rich sections in subgenus Arenaria is monophyletic. (c) 2015 The Linnean Society of London, Botanical Journal of the Linnean Society, 2015, 178, 648-669.
机构:
Chinese Acad Sci, Germplasm Bank Wild Species, Key Lab Biodivers & Biogeog, Kunming Inst Bot, Kunming 650204, Yunnan, Peoples R ChinaChinese Acad Forestry, Res Inst Resources Insects, Kunming 650224, Yunnan, Peoples R China
Yang, Jun-Bo
Yang, Han-Qi
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Chinese Acad Forestry, Res Inst Resources Insects, Kunming 650224, Yunnan, Peoples R ChinaChinese Acad Forestry, Res Inst Resources Insects, Kunming 650224, Yunnan, Peoples R China
Yang, Han-Qi
Li, De-Zhu
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Chinese Acad Sci, Germplasm Bank Wild Species, Key Lab Biodivers & Biogeog, Kunming Inst Bot, Kunming 650204, Yunnan, Peoples R ChinaChinese Acad Forestry, Res Inst Resources Insects, Kunming 650224, Yunnan, Peoples R China
Li, De-Zhu
Wong, Khoon-Meng
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Singapore Bot Gardens, Singapore 259569, SingaporeChinese Acad Forestry, Res Inst Resources Insects, Kunming 650224, Yunnan, Peoples R China
Wong, Khoon-Meng
Yang, Yu-Ming
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SW Forestry Univ, Kunming 650224, Yunnan, Peoples R ChinaChinese Acad Forestry, Res Inst Resources Insects, Kunming 650224, Yunnan, Peoples R China
机构:
Korea Res Inst Biosci & Biotechnol, Int Biol Mat Res Ctr, Taejon 305806, South KoreaKing Saud Univ, Dept Bot & Microbiol, Coll Sci, Riyadh 11451, Saudi Arabia
Choudhary, R. K.
Al-Harbi, Naif A.
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King Saud Univ, Dept Bot & Microbiol, Coll Sci, Riyadh 11451, Saudi Arabia
King Saud Univ, Addiriyah Chair Environm Studies, Coll Sci, Riyadh 11451, Saudi ArabiaKing Saud Univ, Dept Bot & Microbiol, Coll Sci, Riyadh 11451, Saudi Arabia
Al-Harbi, Naif A.
Kim, Soo-Yong
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Korea Res Inst Biosci & Biotechnol, Int Biol Mat Res Ctr, Taejon 305806, South KoreaKing Saud Univ, Dept Bot & Microbiol, Coll Sci, Riyadh 11451, Saudi Arabia
机构:
NW A&F Univ, Coll Vet Med, Yangling 712100, Shaanxi Provinc, Peoples R China
Chinese Acad Agr Sci, Lanzhou Vet Res Inst, State Key Lab Vet Etiol Biol, Key Lab Vet Parasitol Gansu Prov, Lanzhou 730046, Gansu, Peoples R ChinaNW A&F Univ, Coll Vet Med, Yangling 712100, Shaanxi Provinc, Peoples R China
Zhao, Guang-Hui
Li, Hong-Mei
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NW A&F Univ, Coll Vet Med, Yangling 712100, Shaanxi Provinc, Peoples R China
Chinese Acad Agr Sci, Lanzhou Vet Res Inst, State Key Lab Vet Etiol Biol, Key Lab Vet Parasitol Gansu Prov, Lanzhou 730046, Gansu, Peoples R ChinaNW A&F Univ, Coll Vet Med, Yangling 712100, Shaanxi Provinc, Peoples R China
Li, Hong-Mei
Ryan, Una M.
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Murdoch Univ, Sch Vet & Biomed Sci, Murdoch, WA 6150, AustraliaNW A&F Univ, Coll Vet Med, Yangling 712100, Shaanxi Provinc, Peoples R China
Ryan, Una M.
Cong, Mei-Mei
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NW A&F Univ, Coll Vet Med, Yangling 712100, Shaanxi Provinc, Peoples R ChinaNW A&F Univ, Coll Vet Med, Yangling 712100, Shaanxi Provinc, Peoples R China
Cong, Mei-Mei
Hu, Bing
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NW A&F Univ, Coll Vet Med, Yangling 712100, Shaanxi Provinc, Peoples R ChinaNW A&F Univ, Coll Vet Med, Yangling 712100, Shaanxi Provinc, Peoples R China
Hu, Bing
Gao, Man
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NW A&F Univ, Coll Vet Med, Yangling 712100, Shaanxi Provinc, Peoples R ChinaNW A&F Univ, Coll Vet Med, Yangling 712100, Shaanxi Provinc, Peoples R China
Gao, Man
Ren, Wan-Xin
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NW A&F Univ, Coll Vet Med, Yangling 712100, Shaanxi Provinc, Peoples R ChinaNW A&F Univ, Coll Vet Med, Yangling 712100, Shaanxi Provinc, Peoples R China
Ren, Wan-Xin
Wang, Xing-Ye
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NW A&F Univ, Coll Vet Med, Yangling 712100, Shaanxi Provinc, Peoples R ChinaNW A&F Univ, Coll Vet Med, Yangling 712100, Shaanxi Provinc, Peoples R China
Wang, Xing-Ye
Zhang, Shui-Ping
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NW A&F Univ, Coll Vet Med, Yangling 712100, Shaanxi Provinc, Peoples R ChinaNW A&F Univ, Coll Vet Med, Yangling 712100, Shaanxi Provinc, Peoples R China
Zhang, Shui-Ping
Lin, Qing
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NW A&F Univ, Coll Vet Med, Yangling 712100, Shaanxi Provinc, Peoples R ChinaNW A&F Univ, Coll Vet Med, Yangling 712100, Shaanxi Provinc, Peoples R China
Lin, Qing
Zhu, Xing-Quan
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机构:
Chinese Acad Agr Sci, Lanzhou Vet Res Inst, State Key Lab Vet Etiol Biol, Key Lab Vet Parasitol Gansu Prov, Lanzhou 730046, Gansu, Peoples R China
Heilongjiang Bayi Agr Univ, Coll Anim Sci & Vet Med, Daqing 163319, Heilongjiang Pr, Peoples R ChinaNW A&F Univ, Coll Vet Med, Yangling 712100, Shaanxi Provinc, Peoples R China
Zhu, Xing-Quan
Yu, San-Ke
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NW A&F Univ, Coll Vet Med, Yangling 712100, Shaanxi Provinc, Peoples R China
Chinese Acad Agr Sci, Lanzhou Vet Res Inst, State Key Lab Vet Etiol Biol, Key Lab Vet Parasitol Gansu Prov, Lanzhou 730046, Gansu, Peoples R ChinaNW A&F Univ, Coll Vet Med, Yangling 712100, Shaanxi Provinc, Peoples R China