Deep Learning Enables Automatic Classification of Emphysema Pattern at CT
被引:104
作者:
Humphries, Stephen M.
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机构:
Natl Jewish Hlth, Dept Radiol, 1400 Jackson St, Denver, CO 80206 USANatl Jewish Hlth, Dept Radiol, 1400 Jackson St, Denver, CO 80206 USA
Humphries, Stephen M.
[1
]
Notary, Aleena M.
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机构:
Natl Jewish Hlth, Dept Radiol, 1400 Jackson St, Denver, CO 80206 USANatl Jewish Hlth, Dept Radiol, 1400 Jackson St, Denver, CO 80206 USA
Notary, Aleena M.
[1
]
Centeno, Juan Pablo
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h-index: 0
机构:
Natl Jewish Hlth, Dept Radiol, 1400 Jackson St, Denver, CO 80206 USANatl Jewish Hlth, Dept Radiol, 1400 Jackson St, Denver, CO 80206 USA
Centeno, Juan Pablo
[1
]
Strand, Matthew J.
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h-index: 0
机构:
Natl Jewish Hlth, Div Biostat & Bioinformat, 1400 Jackson St, Denver, CO 80206 USANatl Jewish Hlth, Dept Radiol, 1400 Jackson St, Denver, CO 80206 USA
Strand, Matthew J.
[2
]
Crapo, James D.
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h-index: 0
机构:
Natl Jewish Hlth, Dept Med, 1400 Jackson St, Denver, CO 80206 USANatl Jewish Hlth, Dept Radiol, 1400 Jackson St, Denver, CO 80206 USA
Crapo, James D.
[3
]
Silverman, Edwin K.
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机构:
Brigham & Womens Hosp, Channing Div Network Med, 75 Francis St, Boston, MA 02115 USANatl Jewish Hlth, Dept Radiol, 1400 Jackson St, Denver, CO 80206 USA
Silverman, Edwin K.
[4
]
Lynch, David A.
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h-index: 0
机构:
Natl Jewish Hlth, Dept Radiol, 1400 Jackson St, Denver, CO 80206 USANatl Jewish Hlth, Dept Radiol, 1400 Jackson St, Denver, CO 80206 USA
Lynch, David A.
[1
]
机构:
[1] Natl Jewish Hlth, Dept Radiol, 1400 Jackson St, Denver, CO 80206 USA
[2] Natl Jewish Hlth, Div Biostat & Bioinformat, 1400 Jackson St, Denver, CO 80206 USA
[3] Natl Jewish Hlth, Dept Med, 1400 Jackson St, Denver, CO 80206 USA
[4] Brigham & Womens Hosp, Channing Div Network Med, 75 Francis St, Boston, MA 02115 USA
Background: Pattern of emphysema at chest CT, scored visually by using the Fleischner Society system, is associated with physiologic impairment and mortality risk. Purpose: To determine whether participant-level emphysema pattern could predict impairment and mortality when classified by using a deep learning method. Materials and Methods: This retrospective analysis of Genetic Epidemiology of COPD (COPDGene) study participants enrolled between 2007 and 2011 included those with baseline CT, visual emphysema scores, and survival data through 2018. Participants were partitioned into nonoverlapping sets of 2407 for algorithm training, 100 for validation and parameter tuning, and 7143 for testing.A deep learning algorithm using convolutional neural network and long short-term memory architectures was trained to classify pattern of emphysema according to Fleischner criteria. Deep learning scores were compared with visual scores and clinical parameters including pulmonary function tests. Cox proportional hazard models were used to evaluate relationships between emphysema scores and survival. The algorithm was also tested by using CT and clinical data in 1962 participants enrolled in the Evaluation of COPD Longitudinally to Identify Predictive Surrogate End-points (ECLIPSE) study. Results: A total of 7143 COPDGene participants (mean age 6 standard deviation, 59.8 years +/- 8.9; 3734 men and 3409 women) were evaluated. Deep learning emphysema classifications were associated with impaired pulmonary function tests, 6-minute walk distance, and St George's Respiratory Questionnaire at univariate analysis (P < .001 for each). Testing in the ECLIPSE cohort showed similar associations (P < .001). In the COPDGene test cohort, deep learning emphysema classification improved the fit of linear mixed models in the prediction of these clinical parameters compared with visual scoring (P < .001). Compared with participants without emphysema, mortality was greater in participants classified by the deep learning algorithm as having any grade of emphysema (adjusted hazard ratios were 1.5, 1.7, 2.9, 5.3, and 9.7, respectively, for trace, mild, moderate, confluent, and advanced destructive emphysema; P < .05). Conclusion: Deep learning automation of the Fleischner grade of emphysema at chest CT is associated with clinical measures of pulmonary insufficiency and the risk of mortality. (C) RSNA, 2019
机构:
Brigham & Womens Hosp, Channing Div Network Med, Boston, MA 02115 USA
Brigham & Womens Hosp, Div Gen Med, Boston, MA 02115 USABrigham & Womens Hosp, Channing Div Network Med, Boston, MA 02115 USA
Castaldi, Peter J.
Estepar, Raul San Jose
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h-index: 0
机构:
Brigham & Womens Hosp, Surg Planning Lab, Boston, MA 02115 USABrigham & Womens Hosp, Channing Div Network Med, Boston, MA 02115 USA
Estepar, Raul San Jose
Mendoza, Carlos S.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Seville, Signal Proc Dept, Seville, SpainBrigham & Womens Hosp, Channing Div Network Med, Boston, MA 02115 USA
Mendoza, Carlos S.
Hersh, Craig P.
论文数: 0引用数: 0
h-index: 0
机构:
Brigham & Womens Hosp, Channing Div Network Med, Boston, MA 02115 USA
Brigham & Womens Hosp, Div Pulm & Crit Care Med, Boston, MA 02115 USA
Harvard Univ, Sch Med, Boston, MA USABrigham & Womens Hosp, Channing Div Network Med, Boston, MA 02115 USA
Hersh, Craig P.
Laird, Nan
论文数: 0引用数: 0
h-index: 0
机构:
Harvard Univ, Sch Publ Hlth, Dept Biostat, Boston, MA 02115 USABrigham & Womens Hosp, Channing Div Network Med, Boston, MA 02115 USA
Laird, Nan
Crapo, James D.
论文数: 0引用数: 0
h-index: 0
机构:
Natl Jewish Hlth, Dept Med, Denver, CO USABrigham & Womens Hosp, Channing Div Network Med, Boston, MA 02115 USA
Crapo, James D.
Lynch, David A.
论文数: 0引用数: 0
h-index: 0
机构:
Natl Jewish Hlth, Dept Radiol, Denver, CO USABrigham & Womens Hosp, Channing Div Network Med, Boston, MA 02115 USA
Lynch, David A.
Silverman, Edwin K.
论文数: 0引用数: 0
h-index: 0
机构:
Brigham & Womens Hosp, Channing Div Network Med, Boston, MA 02115 USA
Brigham & Womens Hosp, Div Pulm & Crit Care Med, Boston, MA 02115 USA
Harvard Univ, Sch Med, Boston, MA USABrigham & Womens Hosp, Channing Div Network Med, Boston, MA 02115 USA
Silverman, Edwin K.
Washko, George R.
论文数: 0引用数: 0
h-index: 0
机构:
Brigham & Womens Hosp, Div Pulm & Crit Care Med, Boston, MA 02115 USA
Harvard Univ, Sch Med, Boston, MA USABrigham & Womens Hosp, Channing Div Network Med, Boston, MA 02115 USA
机构:
Univ British Columbia, Dept Radiol, Vancouver Gen Hosp, Vancouver, BC V5Z 1M9, Canada
Univ British Columbia, James Hogg Res Ctr, St Pauls Hosp, Providence Heart Lung Inst, Vancouver, BC V5Z 1M9, Canada
Univ Med Ctr, Dept Radiol, Utrecht, NetherlandsUniv British Columbia, Dept Radiol, Vancouver Gen Hosp, Vancouver, BC V5Z 1M9, Canada
Gietema, Hester A.
Mueller, Nestor L.
论文数: 0引用数: 0
h-index: 0
机构:
Univ British Columbia, Dept Radiol, Vancouver Gen Hosp, Vancouver, BC V5Z 1M9, CanadaUniv British Columbia, Dept Radiol, Vancouver Gen Hosp, Vancouver, BC V5Z 1M9, Canada
Mueller, Nestor L.
Fauerbach, Paola V. Nasute
论文数: 0引用数: 0
h-index: 0
机构:
Univ British Columbia, Dept Radiol, Vancouver Gen Hosp, Vancouver, BC V5Z 1M9, CanadaUniv British Columbia, Dept Radiol, Vancouver Gen Hosp, Vancouver, BC V5Z 1M9, Canada
Fauerbach, Paola V. Nasute
Sharma, Sanjay
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h-index: 0
机构:
GlaxoSmithKline R&D, Res Triangle Pk, NC USAUniv British Columbia, Dept Radiol, Vancouver Gen Hosp, Vancouver, BC V5Z 1M9, Canada
Sharma, Sanjay
Edwards, Lisa D.
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h-index: 0
机构:
GlaxoSmithKline R&D, Res Triangle Pk, NC USAUniv British Columbia, Dept Radiol, Vancouver Gen Hosp, Vancouver, BC V5Z 1M9, Canada
Edwards, Lisa D.
Camp, Pat G.
论文数: 0引用数: 0
h-index: 0
机构:
Univ British Columbia, James Hogg Res Ctr, St Pauls Hosp, Providence Heart Lung Inst, Vancouver, BC V5Z 1M9, CanadaUniv British Columbia, Dept Radiol, Vancouver Gen Hosp, Vancouver, BC V5Z 1M9, Canada
Camp, Pat G.
Coxson, Harvey O.
论文数: 0引用数: 0
h-index: 0
机构:
Univ British Columbia, Dept Radiol, Vancouver Gen Hosp, Vancouver, BC V5Z 1M9, Canada
Univ British Columbia, James Hogg Res Ctr, St Pauls Hosp, Providence Heart Lung Inst, Vancouver, BC V5Z 1M9, CanadaUniv British Columbia, Dept Radiol, Vancouver Gen Hosp, Vancouver, BC V5Z 1M9, Canada
机构:
Brigham & Womens Hosp, Channing Div Network Med, Boston, MA 02115 USA
Brigham & Womens Hosp, Div Gen Med, Boston, MA 02115 USABrigham & Womens Hosp, Channing Div Network Med, Boston, MA 02115 USA
Castaldi, Peter J.
Estepar, Raul San Jose
论文数: 0引用数: 0
h-index: 0
机构:
Brigham & Womens Hosp, Surg Planning Lab, Boston, MA 02115 USABrigham & Womens Hosp, Channing Div Network Med, Boston, MA 02115 USA
Estepar, Raul San Jose
Mendoza, Carlos S.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Seville, Signal Proc Dept, Seville, SpainBrigham & Womens Hosp, Channing Div Network Med, Boston, MA 02115 USA
Mendoza, Carlos S.
Hersh, Craig P.
论文数: 0引用数: 0
h-index: 0
机构:
Brigham & Womens Hosp, Channing Div Network Med, Boston, MA 02115 USA
Brigham & Womens Hosp, Div Pulm & Crit Care Med, Boston, MA 02115 USA
Harvard Univ, Sch Med, Boston, MA USABrigham & Womens Hosp, Channing Div Network Med, Boston, MA 02115 USA
Hersh, Craig P.
Laird, Nan
论文数: 0引用数: 0
h-index: 0
机构:
Harvard Univ, Sch Publ Hlth, Dept Biostat, Boston, MA 02115 USABrigham & Womens Hosp, Channing Div Network Med, Boston, MA 02115 USA
Laird, Nan
Crapo, James D.
论文数: 0引用数: 0
h-index: 0
机构:
Natl Jewish Hlth, Dept Med, Denver, CO USABrigham & Womens Hosp, Channing Div Network Med, Boston, MA 02115 USA
Crapo, James D.
Lynch, David A.
论文数: 0引用数: 0
h-index: 0
机构:
Natl Jewish Hlth, Dept Radiol, Denver, CO USABrigham & Womens Hosp, Channing Div Network Med, Boston, MA 02115 USA
Lynch, David A.
Silverman, Edwin K.
论文数: 0引用数: 0
h-index: 0
机构:
Brigham & Womens Hosp, Channing Div Network Med, Boston, MA 02115 USA
Brigham & Womens Hosp, Div Pulm & Crit Care Med, Boston, MA 02115 USA
Harvard Univ, Sch Med, Boston, MA USABrigham & Womens Hosp, Channing Div Network Med, Boston, MA 02115 USA
Silverman, Edwin K.
Washko, George R.
论文数: 0引用数: 0
h-index: 0
机构:
Brigham & Womens Hosp, Div Pulm & Crit Care Med, Boston, MA 02115 USA
Harvard Univ, Sch Med, Boston, MA USABrigham & Womens Hosp, Channing Div Network Med, Boston, MA 02115 USA
机构:
Univ British Columbia, Dept Radiol, Vancouver Gen Hosp, Vancouver, BC V5Z 1M9, Canada
Univ British Columbia, James Hogg Res Ctr, St Pauls Hosp, Providence Heart Lung Inst, Vancouver, BC V5Z 1M9, Canada
Univ Med Ctr, Dept Radiol, Utrecht, NetherlandsUniv British Columbia, Dept Radiol, Vancouver Gen Hosp, Vancouver, BC V5Z 1M9, Canada
Gietema, Hester A.
Mueller, Nestor L.
论文数: 0引用数: 0
h-index: 0
机构:
Univ British Columbia, Dept Radiol, Vancouver Gen Hosp, Vancouver, BC V5Z 1M9, CanadaUniv British Columbia, Dept Radiol, Vancouver Gen Hosp, Vancouver, BC V5Z 1M9, Canada
Mueller, Nestor L.
Fauerbach, Paola V. Nasute
论文数: 0引用数: 0
h-index: 0
机构:
Univ British Columbia, Dept Radiol, Vancouver Gen Hosp, Vancouver, BC V5Z 1M9, CanadaUniv British Columbia, Dept Radiol, Vancouver Gen Hosp, Vancouver, BC V5Z 1M9, Canada
Fauerbach, Paola V. Nasute
Sharma, Sanjay
论文数: 0引用数: 0
h-index: 0
机构:
GlaxoSmithKline R&D, Res Triangle Pk, NC USAUniv British Columbia, Dept Radiol, Vancouver Gen Hosp, Vancouver, BC V5Z 1M9, Canada
Sharma, Sanjay
Edwards, Lisa D.
论文数: 0引用数: 0
h-index: 0
机构:
GlaxoSmithKline R&D, Res Triangle Pk, NC USAUniv British Columbia, Dept Radiol, Vancouver Gen Hosp, Vancouver, BC V5Z 1M9, Canada
Edwards, Lisa D.
Camp, Pat G.
论文数: 0引用数: 0
h-index: 0
机构:
Univ British Columbia, James Hogg Res Ctr, St Pauls Hosp, Providence Heart Lung Inst, Vancouver, BC V5Z 1M9, CanadaUniv British Columbia, Dept Radiol, Vancouver Gen Hosp, Vancouver, BC V5Z 1M9, Canada
Camp, Pat G.
Coxson, Harvey O.
论文数: 0引用数: 0
h-index: 0
机构:
Univ British Columbia, Dept Radiol, Vancouver Gen Hosp, Vancouver, BC V5Z 1M9, Canada
Univ British Columbia, James Hogg Res Ctr, St Pauls Hosp, Providence Heart Lung Inst, Vancouver, BC V5Z 1M9, CanadaUniv British Columbia, Dept Radiol, Vancouver Gen Hosp, Vancouver, BC V5Z 1M9, Canada