Complete chloroplast genome sequence of Taxillus chinensis (Loranthaceae): a hemiparasitic shrub in South China

被引:5
|
作者
Liu, Bingbing [1 ]
Zhang, Ying [1 ]
Shi, Yancai [2 ,3 ]
机构
[1] Shanxi Univ, Inst Loess Plateau, Taiyuan 030006, Shanxi, Peoples R China
[2] Guangxi Inst Bot, Guangxi Key Lab Plant Conservat & Restorat Ecol K, Guilin, Guangxi Zhuang, Peoples R China
[3] Chinese Acad Sci, Guilin, Peoples R China
来源
MITOCHONDRIAL DNA PART B-RESOURCES | 2019年 / 4卷 / 02期
关键词
Taxillus chinensis; chloroplast genome; phylogenetic analysis;
D O I
10.1080/23802359.2019.1666680
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Taxillus chinensis (DC) Danser, which is a hemiparasitic shrub distributed in southern China and Southeast Asian countries, is wildly used in various traditional Chinese medicine prescriptions. In this study, the complete chloroplast genome of the T. chinensis was assembled from the whole genome Illumina sequencing data. The complete plastome is a typical quadripartite structure with a length of 121,305 bp, which contained two inverted repeats (IRs) of 22,460 bp separated by a large single-copy (LSC) and a small single copy (SSC) of 70,295 bp and 6090 bp, respectively. The plastome contains 106 genes, comprising 66 protein-coding genes, 28 tRNA genes, eight rRNA genes, and four processed pseudogenes. The overall GC content of the plastome is 37.4%, which is unevenly distributed across the whole chloroplast genome. The phylogenetic analysis shows that T. chinensis was closely related to the congeneric species T. sutchuenensis.
引用
收藏
页码:3077 / 3078
页数:2
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