A network pharmacology approach to explore the potential targets underlying the effect of sinomenine on rheumatoid arthritis

被引:50
作者
Guo Xiang [1 ]
Ji Jinyu [1 ]
Feng Zhitao [1 ,2 ]
Hou Xiaoqiang [2 ]
Luo Yanan [1 ]
Mei Zhigang [1 ]
机构
[1] China Three Gorges Univ, Third Grade Pharmacol Lab Chinese Med Approved St, Med Coll, Yichang 443002, Hubei, Peoples R China
[2] China Three Gorges Univ, Inst Rheumatol, Coll Clin Med Sci 1, Yichang 443003, Hubei, Peoples R China
基金
中国国家自然科学基金;
关键词
Sinomenine; Rheumatoid arthritis; Network pharmacology; Enrichment analysis; SYNOVIAL FIBROBLASTS; CELL JUNCTIONS; DRUG-TREATMENT; WEB SERVER; MECHANISMS; EXPRESSION; DISEASE; KINASE; IDENTIFICATION; PERMEABILITY;
D O I
10.1016/j.intimp.2020.106201
中图分类号
R392 [医学免疫学]; Q939.91 [免疫学];
学科分类号
100102 ;
摘要
Objective: To explore the potential targets underlying the effect of sinomenine (SIN) on rheumatoid arthritis (RA) by utilizing a network pharmacology approach. Methods: SIN and its drug targets were identified using network analysis followed by experimental validation. First, the Pharmmapper, UniProt and GeneCards databases were mined for information relevant to the prediction of SIN targets and RA-related targets. Second, the SIN-target gene and SIN-RA target gene networks were created in Cytoscape software followed by the collection of the candidate targets of each component by R software. Eventually, the key targets and enriched pathways were examined by Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analysis. Results: Sixty-seven potential targets of SIN and 3797 related targets involved in RA were subjected to network analysis, and the 20 intersection targets indicated the principal pathways linked to RA. Additionally, 16 key targets, which were linked to more than three genes, were determined to be crucial genes. GO analysis showed that 14 biological processes, 5 cellular components and 2 molecular functions were identified, when corrected by a P value <= 0.01. Seven related signaling pathways were identified by KEGG analysis, when corrected according to a Bonferroni P value <= 0.05. Conclusion The present study explored the potential targets and signaling pathways of SIN during the treatment of RA, which may help to illustrate the mechanism (s) involved in the action of SIN and may provide a better understanding of its anti-rheumatoid arthritis effects in terms of inhibiting angiogenesis, synovial hyperplasia, and bone destruction.
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页数:10
相关论文
共 84 条
[1]   Anti-inflammatory effects of a low arachidonic acid diet and fish oil in patients with rheumatoid arthritis [J].
Adam, O ;
Beringer, C ;
Kless, T ;
Lemmen, C ;
Adam, A ;
Wiseman, M ;
Adam, P ;
Klimmek, R ;
Forth, W .
RHEUMATOLOGY INTERNATIONAL, 2003, 23 (01) :27-36
[2]   RAACFDb: Rheumatoid arthritis ayurvedic classical formulations database [J].
Ali, A. M. Mohamed Thoufic ;
Agrawal, Aakash ;
Lulu, S. Sajitha ;
Priya, A. Mohana ;
Vino, S. .
JOURNAL OF ETHNOPHARMACOLOGY, 2017, 197 :87-91
[3]  
[Anonymous], CHIN J IMMUNOL
[4]  
[Anonymous], 2014, J CLIN ONCOL
[5]  
[Anonymous], PLOS ONE
[6]  
[Anonymous], 2017, RHEUMATISM ARTHRITIS
[7]  
[Anonymous], PLOS ONE
[8]   Mast cells as a target in the treatment of rheumatoid arthritis [J].
Bakharevski O. ;
Ryan P.F.J. .
InflammoPharmacology, 1999, 7 (4) :351-362
[9]   Endothelial cell-to-cell junctions: Molecular organization and role in vascular homeostasis [J].
Bazzoni, G ;
Dejana, E .
PHYSIOLOGICAL REVIEWS, 2004, 84 (03) :869-901
[10]   Network-based Approaches in Pharmacology [J].
Boezio, Baptiste ;
Audouze, Karine ;
Ducrot, Pierre ;
Taboureau, Olivier .
MOLECULAR INFORMATICS, 2017, 36 (10)