Extending the Bayesian mixture model to incorporate spatial information in analysing sheep CAT scan images

被引:11
作者
Alston, CL [1 ]
Mengersen, KL
Thompson, JM
Littlefield, PJ
Perry, D
Ball, AJ
机构
[1] Univ Newcastle, Sch Math & Phys Sci, Callaghan, NSW 2308, Australia
[2] Queensland Univ Technol, Sch Math Sci, Brisbane, Qld 4001, Australia
[3] Univ New England, Cooperat Res Ctr Cattle & Beef Ind, Armidale, NSW 2351, Australia
[4] Univ New England, Meat & Livestock Australia, Armidale, NSW 2351, Australia
来源
AUSTRALIAN JOURNAL OF AGRICULTURAL RESEARCH | 2005年 / 56卷 / 04期
关键词
density estimation; Gibbs sampling; Markov Chain Monte Carlo; Markov random field; Metropolis-Hastings algorithm; posterior simulation;
D O I
10.1071/AR04211
中图分类号
S [农业科学];
学科分类号
09 ;
摘要
The purpose of CAT scanning in some animal science experiments is to provide estimates of the proportion of the tissues, fat, muscle, and bone present in an individual body, and compare some of the density characteristics. In this paper we present an extension to the hierarchical Bayesian Normal mixture model, which incorporates some of the information provided by the neighbouring pixels in a CAT scan image. This neighbour information is included in the model through the use of a Markov random field for the component allocation variable. This extended mixture model provides a more responsive fit to the local likelihood of the data than that of the independent mixture model. The effectiveness of this modelling technique is illustrated by comparing its performance with that of a Normal mixture model and a fixed boundary method in 3 examples. In these examples it is shown that the extended mixture model we propose is most useful in situations that involve only slight separation of components. The advantages of the model decline as the separation of components increases.
引用
收藏
页码:373 / 388
页数:16
相关论文
共 19 条
[1]   Statistical analysis of sheep CAT scan images using a Bayesian mixture model [J].
Alston, CL ;
Mengersen, KL ;
Thompson, JM ;
Littlefield, PJ ;
Perry, D ;
Ball, AJ .
AUSTRALIAN JOURNAL OF AGRICULTURAL RESEARCH, 2004, 55 (01) :57-68
[2]  
[Anonymous], 2000, C&H TEXT STAT SCI
[3]  
[Anonymous], 1995, CODA CONVERGENCE DIA
[4]  
[Anonymous], THESIS U WASHINGTON
[5]   Changes in maintenance energy requirements of mature sheep fed at different levels of feed intake at maintenance, during weight loss and realimentation [J].
Ball, AJ ;
Thompson, JM ;
Alston, CL ;
Blakely, AR ;
Hinch, GN .
LIVESTOCK PRODUCTION SCIENCE, 1998, 53 (03) :191-204
[6]   Modelling spatially correlated data via mixtures:: a Bayesian approach [J].
Fernández, C ;
Green, PJ .
JOURNAL OF THE ROYAL STATISTICAL SOCIETY SERIES B-STATISTICAL METHODOLOGY, 2002, 64 :805-826
[7]   Estimators of tissue proportions from X-ray CT images [J].
Glasbey, CA ;
Robinson, CD .
BIOMETRICS, 2002, 58 (04) :928-936
[8]  
GRUET MA, 1998, DISCRETIZATION MCMC, P161
[9]   Tissue mobilization rates in male fallow deer (Dama dama) as determined by computed tomography: the effects of natural and enforced food restriction [J].
Jopson, NB ;
Thompson, JM ;
Fennessy, PF .
ANIMAL SCIENCE, 1997, 65 :311-320
[10]   BAYES FACTORS [J].
KASS, RE ;
RAFTERY, AE .
JOURNAL OF THE AMERICAN STATISTICAL ASSOCIATION, 1995, 90 (430) :773-795