A Probabilistic model-based approach to consistent white matter tract segmentation

被引:60
作者
Clayden, Jonathan D.
Storkey, Amos J.
Bastin, Mark E. [1 ]
机构
[1] Univ Edinburgh, Sch Clin Sci & Community Hlth, Edinburgh EH4 2XU, Midlothian, Scotland
[2] Univ Edinburgh, Sch Informat, Neuroinformat Doctoral Training Ctr, Edinburgh EH1 2QL, Midlothian, Scotland
[3] Univ Edinburgh, Sch Informat, Inst Adapt & Neural Computat, Edinburgh EH1 2QL, Midlothian, Scotland
关键词
brain; diffusion; magnetic resonance imaging; model; probabilistic; tractography; segmentation; white matter;
D O I
10.1109/TMI.2007.905826
中图分类号
TP39 [计算机的应用];
学科分类号
081203 ; 0835 ;
摘要
Since the invention of diffusion magnetic resonance imaging (dMRI), currently the only established method for studying white matter connectivity in a clinical environment, there has been a great deal of interest in the effects of various pathologies on the connectivity of the brain. As methods for ill vivo tractography have been developed, it has become possible to track and segment specific white matter structures of interest for particular study. However, the consistency and reproducibility of tractography-based segmentation remain limited, and attempts to improve them have thus far typically involved the imposition of strong constraints on the tract reconstruction process itself. In this work we take a different approach, developing a formal probabilistic model for the relationships between comparable tracts in different scans, and then using it to choose a tract, a posteriori, which best matches a predefined reference tract for the structure of interest. We demonstrate that this method is able to significantly improve segmentation consistency without directly constraining the tractography algorithm.
引用
收藏
页码:1555 / 1561
页数:7
相关论文
共 29 条
[1]  
Basser PJ, 2000, MAGNET RESON MED, V44, P625, DOI 10.1002/1522-2594(200010)44:4<625::AID-MRM17>3.0.CO
[2]  
2-O
[3]   ESTIMATION OF THE EFFECTIVE SELF-DIFFUSION TENSOR FROM THE NMR SPIN-ECHO [J].
BASSER, PJ ;
MATTIELLO, J ;
LEBIHAN, D .
JOURNAL OF MAGNETIC RESONANCE SERIES B, 1994, 103 (03) :247-254
[4]   Probabilistic diffusion tractography with multiple fibre orientations: What can we gain? [J].
Behrens, T. E. J. ;
Berg, H. Johansen ;
Jbabdi, S. ;
Rushworth, M. F. S. ;
Woolrich, M. W. .
NEUROIMAGE, 2007, 34 (01) :144-155
[5]   Characterization and propagation of uncertainty in diffusion-weighted MR imaging [J].
Behrens, TEJ ;
Woolrich, MW ;
Jenkinson, M ;
Johansen-Berg, H ;
Nunes, RG ;
Clare, S ;
Matthews, PM ;
Brady, JM ;
Smith, SM .
MAGNETIC RESONANCE IN MEDICINE, 2003, 50 (05) :1077-1088
[6]  
Brun A, 2004, LECT NOTES COMPUT SC, V3216, P368
[7]   From diffusion tractography to quantitative white matter tract measures: a reproducibility study [J].
Ciccarelli, O ;
Parker, GJM ;
Toosy, AT ;
Wheeler-Kingshott, CAM ;
Barker, GJ ;
Boulby, PA ;
Miller, DH ;
Thompson, AJ .
NEUROIMAGE, 2003, 18 (02) :348-359
[8]   Improved segmentation reproducibility in group tractography using a quantitative tract similarity measure [J].
Clayden, Jonathan D. ;
Bastin, Mark E. ;
Storkey, Amos J. .
NEUROIMAGE, 2006, 33 (02) :482-492
[9]   Tracking neuronal fiber pathways in the living human brain [J].
Conturo, TE ;
Lori, NF ;
Cull, TS ;
Akbudak, E ;
Snyder, AZ ;
Shimony, JS ;
McKinstry, RC ;
Burton, H ;
Raichle, ME .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1999, 96 (18) :10422-10427
[10]   Fiber tract-oriented statistics for quantitative diffusion tensor MRI analysis [J].
Corouge, Isabelle ;
Fletcher, P. Thomas ;
Joshi, Sarang ;
Gouttard, Sylvain ;
Gerig, Guido .
MEDICAL IMAGE ANALYSIS, 2006, 10 (05) :786-798