Hydration in aqueous osmolyte solutions: the case of TMAO and urea

被引:15
作者
Sahle, Christoph J. [1 ]
Schroer, Martin A. [2 ]
Niskanen, Johannes [3 ]
Elbers, Mirko [4 ]
Jeffries, Cy M. [2 ]
Sternemann, Christian [4 ]
机构
[1] European Synchrotron Radiat Facil, 71 Ave Martyrs, F-38000 Grenoble, France
[2] DESY, Hamburg Outstn, EMBL, Notkestr 85, D-22607 Hamburg, Germany
[3] Univ Turku, Dept Phys & Astron, FI-20014 Turun, Yliopisto, Finland
[4] Tech Univ Dortmund, DELTA, Fak Phys, D-44221 Dortmund, Germany
关键词
TRIMETHYLAMINE-N-OXIDE; X-RAY; WATER-STRUCTURE; MOLECULAR-MECHANISM; PROTEIN DENATURATION; CRYSTAL-STRUCTURE; DYNAMICS; SCATTERING; EQUILIBRIUM; SOLVATION;
D O I
10.1039/c9cp06785j
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
The hydration and hydrogen-bond topology of small water solvated molecules such as the naturally occurring organic osmolytes trimethylamine N-oxide (TMAO) and urea are under intense investigation. We aim at furthering the understanding of this complex hydration by combining experimental oxygen K-edge excitation spectra with results from spectra calculated via the Bethe-Salpeter equation based on structures obtained from ab initio molecular dynamics simulations. Comparison of experimental and calculated spectra allows us to extract detailed information about the immediate surrounding of the solute molecules in the solvated state. We quantify and localize the influence of the solute on the hydrogen bond network of the water solvent and find spectroscopic fingerprints of a clear directional asymmetry around TMAO with strong and local kosmotropic influence around TMAO's NO head group and slight chaotropic influence around the hydrophobic methyl groups. The influence of urea on the local water network is qualitatively similar to that of TMAO but weaker in magnitude. The strongest influence of both molecules on the shape of the oxygen K-edge spectra is found in the first hydration shells.
引用
收藏
页码:11614 / 11624
页数:11
相关论文
共 93 条
[1]  
[Anonymous], 2009, Ab Initio Molecular Dynamics: Basic theory and Advanced Methods
[2]   Osmolyte trimethylamine-N-oxide does not affect the strength of hydrophobic interactions:: Origin of osmolyte compatibility [J].
Athawale, MV ;
Dordick, JS ;
Garde, S .
BIOPHYSICAL JOURNAL, 2005, 89 (02) :858-866
[3]   Predicting the energetics of osmolyte-induced protein folding/unfolding [J].
Auton, M ;
Bolen, DW .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2005, 102 (42) :15065-15068
[4]   How Different Are the Characteristics of Aqueous Solutions of tert-Butyl Alcohol and Trimethylamine-N-Oxide? A Molecular Dynamics Simulation Study [J].
Bandyopadhyay, Dibyendu ;
Kamble, Yash ;
Choudhury, Niharendu .
JOURNAL OF PHYSICAL CHEMISTRY B, 2018, 122 (34) :8220-8232
[5]   Forcing thermodynamically unfolded proteins to fold [J].
Baskakov, I ;
Bolen, DW .
JOURNAL OF BIOLOGICAL CHEMISTRY, 1998, 273 (09) :4831-4834
[6]   Impact of protein denaturants and stabilizers on water structure [J].
Batchelor, JD ;
Olteanu, A ;
Tripathy, A ;
Pielak, GJ .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2004, 126 (07) :1958-1961
[7]   Counteraction of urea-induced protein denaturation by trimethylamine N-oxide:: A chemical chaperone at atomic resolution [J].
Bennion, BJ ;
Daggett, V .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2004, 101 (17) :6433-6438
[8]   The molecular basis for the chemical denaturation of proteins by urea [J].
Bennion, BJ ;
Daggett, V .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2003, 100 (09) :5142-5147
[9]   Protein stabilization by urea and guanidine hydrochloride [J].
Bhuyan, AK .
BIOCHEMISTRY, 2002, 41 (45) :13386-13394
[10]   Influence of Osmolytes on Protein and Water Structure: A Step To Understanding the Mechanism of Protein Stabilization [J].
Bruzdziak, Piotr ;
Panuszko, Aneta ;
Stangret, Janusz .
JOURNAL OF PHYSICAL CHEMISTRY B, 2013, 117 (39) :11502-11508