7-lncRNA Assessment Model for Monitoring and Prognosis of Breast Cancer Patients: Based on Cox Regression and Co-expression Analysis

被引:41
作者
Li, Huayao [1 ]
Gao, Chundi [2 ]
Liu, Lijuan [3 ,4 ]
Zhuang, Jing [3 ,4 ]
Yang, Jing [3 ]
Liu, Cun [2 ]
Zhou, Chao [3 ,4 ]
Feng, Fubin [3 ,4 ]
Sun, Changgang [5 ]
机构
[1] Shandong Univ Tradit Chinese Med, Coll Chinese Med, Jinan, Shandong, Peoples R China
[2] Shandong Univ Tradit Chinese Med, Coll Clin Med 1, Jinan, Shandong, Peoples R China
[3] Weifang Tradit Chinese Hosp, Dept Oncol, Weifang, Peoples R China
[4] Weifang Med Univ, Dept Oncol, Affiliated Hosp, Weifang, Peoples R China
[5] Shandong Univ Tradit Chinese Med, Chinese Med Innovat Inst, Jinan, Shandong, Peoples R China
基金
中国国家自然科学基金;
关键词
breast cancer; univariate and multivariate Cox analyses; bioinformatic analysis; 7-lncRNA model; co-expression analysis; NONCODING RNA; EXPRESSION; GENES; IDENTIFICATION; METHYLATION; PREDICTION; DIAGNOSIS; BLU;
D O I
10.3389/fonc.2019.01348
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
Background: Breast cancer is one of the deadliest malignant tumors worldwide. Due to its complex molecular and cellular heterogeneity, the efficacy of existing breast cancer risk prediction models is unsatisfactory. In this study, we developed a new lncRNA model to predict the prognosis of patients with BRCA. Methods: BRCA-related differentially-expressed long non-coding RNA were screened from the Cancer Genome Atlas database. A novel lncRNA model was developed by univariate and multivariate analyses to predict the prognosis of patients with BRCA. The efficacy of the model was verified by TCGA-based breast cancer samples. Identified lncRNA-related mRNA based on the co-expression method. Results: We constructed a 7-lncRNA breast cancer prediction model including LINC00377, LINC00536, LINC01224, LINC00668, LINC01234, LINC02037, and LINC01456. The breast cancer samples were divided into high-risk and low-risk groups based on the model, which verified the specificity and sensitivity of the model. The Area Under Curve (AUC) of the 3- and 5-year Receiver Operating Characteristic curve were 0.711 and 0.734, respectively, indicating that the model has good performance. Conclusion: We constructed a 7-lncRNA model to predict the prognosis of patients with BRCA, and suggest that these lncRNAs may play a specific role in the carcinogenesis of BRCA.
引用
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页数:12
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