Unconventional RNA-binding proteins step into the virus-host battlefront

被引:47
|
作者
Garcia-Moreno, Manuel [1 ]
Jaervelin, Aino I. [1 ]
Castello, Alfredo [1 ]
机构
[1] Univ Oxford, Dept Biochem, South Parks Rd, Oxford OX1 3QU, England
基金
英国医学研究理事会;
关键词
infection; RBPome; RNA; RNA-binding domain; RNA-binding protein; RNA interactome capture; RNA metabolism; translation; virus; HIV-1; DRUG-RESISTANCE; MESSENGER-RNA; STRESS GRANULES; HEPATITIS-C; INFLUENZA-A; VIRAL-RNA; LIFE-CYCLE; P-BODIES; TRANSLATION INHIBITION; INTRINSIC DISORDER;
D O I
10.1002/wrna.1498
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
The crucial participation of cellular RNA-binding proteins (RBPs) in virtually all steps of virus infection has been known for decades. However, most of the studies characterizing this phenomenon have focused on well-established RBPs harboring classical RNA-binding domains (RBDs). Recent proteome-wide approaches have greatly expanded the census of RBPs, discovering hundreds of proteins that interact with RNA through unconventional RBDs. These domains include protein-protein interaction platforms, enzymatic cores, and intrinsically disordered regions. Here, we compared the experimentally determined census of RBPs to gene ontology terms and literature, finding that 472 proteins have previous links with viruses. We discuss what these proteins are and what their roles in infection might be. We also review some of the pioneering examples of unorthodox RBPs whose RNA-binding activity has been shown to be critical for virus infection. Finally, we highlight the potential of these proteins for host-based therapies against viruses. This article is categorized under: RNA Interactions with Proteins and Other Molecules > Protein-RNA Interactions: Functional Implications RNA in Disease and Development > RNA in Disease RNA Interactions with Proteins and Other Molecules > RNA-Protein Complexes
引用
收藏
页数:20
相关论文
共 50 条
  • [1] Diverse roles of host RNA-binding proteins in RNA virus replication
    Li, Zhenghe
    Nagy, Peter D.
    RNA BIOLOGY, 2011, 8 (02) : 305 - 315
  • [2] Nuclear RNA-binding proteins meet cytoplasmic viruses
    Castello, Alfredo
    Kamel, Wael
    RNA, 2025, 31 (03) : 444 - 451
  • [3] Unconventional RNA-binding proteins: an uncharted zone in RNA biology
    Albihlal, Waleed S.
    Gerber, Andre P.
    FEBS LETTERS, 2018, 592 (17): : 2917 - 2931
  • [4] Host RNA-Binding Proteins as Regulators of HIV-1 Replication
    Giraldo-Ocampo, Sebastian
    Valiente-Echeverria, Fernando
    Soto-Rifo, Ricardo
    VIRUSES-BASEL, 2025, 17 (01):
  • [5] The expanding universe of ribonucleoproteins: of novel RNA-binding proteins and unconventional interactions
    Beckmann, Benedikt M.
    Castello, Alfredo
    Medenbach, Jan
    PFLUGERS ARCHIV-EUROPEAN JOURNAL OF PHYSIOLOGY, 2016, 468 (06): : 1029 - 1040
  • [6] RNA-binding proteins in Mendelian disease
    Castello, Alfredo
    Fischer, Bernd
    Hentze, Matthias W.
    Preiss, Thomas
    TRENDS IN GENETICS, 2013, 29 (05) : 318 - 327
  • [7] Chloroplast RNA-binding proteins
    Jörg Nickelsen
    Current Genetics, 2003, 43 : 392 - 399
  • [9] Chloroplast RNA-binding proteins
    Nickelsen, J
    CURRENT GENETICS, 2003, 43 (06) : 392 - 399
  • [10] RNA-binding proteins: The next step in translating skeletal muscle adaptations?
    Van Pelt, Douglas W.
    Hettinger, Zachary R.
    Vanderklish, Peter W.
    JOURNAL OF APPLIED PHYSIOLOGY, 2019, 127 (02) : 654 - 660