Three-dimensional cost-matrix optimization and maximum cospeciation

被引:30
作者
Ronquist, F [1 ]
机构
[1] Uppsala Univ, Dept Zool, SE-75236 Uppsala, Sweden
来源
CLADISTICS-THE INTERNATIONAL JOURNAL OF THE WILLI HENNIG SOCIETY | 1998年 / 14卷 / 02期
关键词
D O I
10.1111/j.1096-0031.1998.tb00330.x
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
In recent years, event-based approaches have been gaining ground in coevolutionary and biogeographical inference. Unlike pattern-based methods, event-based protocols deal directly with evolutionary events, such as dispersals and host switches. Three protocols have been proposed to date: (1) a coevolutionary method based on optimization of a standard two-dimensional cost matrix; (2) dispersal-vicariance analysis, based on optimization of a three-dimensional cost matrix; and (3) the maximum cospeciation method, thus far not considered a cost matrix method. I describe here general three-dimensional cost matrix optimization algorithms and how they can be applied to the maximum cospeciation problem. The new algorithms demonstrate that all existing event-based protocols, as well as possible future methods based on more complicated process models, can be incorporated into the three-dimensional cost matrix optimization framework. (C) 1998 The Willi Hennig Society.
引用
收藏
页码:167 / 172
页数:6
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