Decoding the human genome

被引:31
作者
Frazer, Kelly A. [1 ,2 ]
机构
[1] Univ Calif San Diego, Dept Pediat, Moores UCSD Canc Ctr, La Jolla, CA 92093 USA
[2] Univ Calif San Diego, Rady Childrens Hosp, La Jolla, CA 92093 USA
关键词
DOMAINS; NUMBER; GENES;
D O I
10.1101/gr.146175.112
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
引用
收藏
页码:1599 / 1601
页数:3
相关论文
共 33 条
[1]  
[Anonymous], NATURE IN PRESS
[2]   Sequence and chromatin determinants of cell-type-specific transcription factor binding [J].
Arvey, Aaron ;
Agius, Phaedra ;
Noble, William Stafford ;
Leslie, Christina .
GENOME RESEARCH, 2012, 22 (09) :1723-1734
[3]   Long noncoding RNAs are rarely translated in two human cell lines [J].
Banfai, Balazs ;
Jia, Hui ;
Khatun, Jainab ;
Wood, Emily ;
Risk, Brian ;
Gundling, William E., Jr. ;
Kundaje, Anshul ;
Gunawardena, Harsha P. ;
Yu, Yanbao ;
Xie, Ling ;
Krajewski, Krzysztof ;
Strahl, Brian D. ;
Chen, Xian ;
Bickel, Peter ;
Giddings, Morgan C. ;
Brown, James B. ;
Lipovich, Leonard .
GENOME RESEARCH, 2012, 22 (09) :1646-1657
[4]   Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project [J].
Birney, Ewan ;
Stamatoyannopoulos, John A. ;
Dutta, Anindya ;
Guigo, Roderic ;
Gingeras, Thomas R. ;
Margulies, Elliott H. ;
Weng, Zhiping ;
Snyder, Michael ;
Dermitzakis, Emmanouil T. ;
Stamatoyannopoulos, John A. ;
Thurman, Robert E. ;
Kuehn, Michael S. ;
Taylor, Christopher M. ;
Neph, Shane ;
Koch, Christoph M. ;
Asthana, Saurabh ;
Malhotra, Ankit ;
Adzhubei, Ivan ;
Greenbaum, Jason A. ;
Andrews, Robert M. ;
Flicek, Paul ;
Boyle, Patrick J. ;
Cao, Hua ;
Carter, Nigel P. ;
Clelland, Gayle K. ;
Davis, Sean ;
Day, Nathan ;
Dhami, Pawandeep ;
Dillon, Shane C. ;
Dorschner, Michael O. ;
Fiegler, Heike ;
Giresi, Paul G. ;
Goldy, Jeff ;
Hawrylycz, Michael ;
Haydock, Andrew ;
Humbert, Richard ;
James, Keith D. ;
Johnson, Brett E. ;
Johnson, Ericka M. ;
Frum, Tristan T. ;
Rosenzweig, Elizabeth R. ;
Karnani, Neerja ;
Lee, Kirsten ;
Lefebvre, Gregory C. ;
Navas, Patrick A. ;
Neri, Fidencio ;
Parker, Stephen C. J. ;
Sabo, Peter J. ;
Sandstrom, Richard ;
Shafer, Anthony .
NATURE, 2007, 447 (7146) :799-816
[5]   Annotation of functional variation in personal genomes using RegulomeDB [J].
Boyle, Alan P. ;
Hong, Eurie L. ;
Hariharan, Manoj ;
Cheng, Yong ;
Schaub, Marc A. ;
Kasowski, Maya ;
Karczewski, Konrad J. ;
Park, Julie ;
Hitz, Benjamin C. ;
Weng, Shuai ;
Cherry, J. Michael ;
Snyder, Michael .
GENOME RESEARCH, 2012, 22 (09) :1790-1797
[6]   Understanding transcriptional regulation by integrative analysis of transcription factor binding data [J].
Cheng, Chao ;
Alexander, Roger ;
Min, Renqiang ;
Leng, Jing ;
Yip, Kevin Y. ;
Rozowsky, Joel ;
Yan, Koon-Kiu ;
Dong, Xianjun ;
Djebali, Sarah ;
Ruan, Yijun ;
Davis, Carrie A. ;
Carninci, Piero ;
Lassman, Timo ;
Gingerasi, Thomas R. ;
Guigo, Roderic ;
Birney, Ewan ;
Weng, Zhiping ;
Snyder, Michael ;
Gerstein, Mark .
GENOME RESEARCH, 2012, 22 (09) :1658-1667
[7]   Distinguishing protein-coding and noncoding genes in the human genome [J].
Clamp, Michele ;
Fry, Ben ;
Kamal, Mike ;
Xie, Xiaohui ;
Cuff, James ;
Lin, Michael F. ;
Kellis, Manolis ;
Lindblad-Toh, Kerstin ;
Lander, Eric S. .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2007, 104 (49) :19428-19433
[8]   Gene number - What if there are only 30,000 human genes? [J].
Claverie, JM .
SCIENCE, 2001, 291 (5507) :1255-1257
[9]   The GENCODE v7 catalog of human long noncoding RNAs: Analysis of their gene structure, evolution, and expression [J].
Derrien, Thomas ;
Johnson, Rory ;
Bussotti, Giovanni ;
Tanzer, Andrea ;
Djebali, Sarah ;
Tilgner, Hagen ;
Guernec, Gregory ;
Martin, David ;
Merkel, Angelika ;
Knowles, David G. ;
Lagarde, Julien ;
Veeravalli, Lavanya ;
Ruan, Xiaoan ;
Ruan, Yijun ;
Lassmann, Timo ;
Carninci, Piero ;
Brown, James B. ;
Lipovich, Leonard ;
Gonzalez, Jose M. ;
Thomas, Mark ;
Davis, Carrie A. ;
Shiekhattar, Ramin ;
Gingeras, Thomas R. ;
Hubbard, Tim J. ;
Notredame, Cedric ;
Harrow, Jennifer ;
Guigo, Roderic .
GENOME RESEARCH, 2012, 22 (09) :1775-1789
[10]  
Djebali S., 2012, NATURE, V489, P101, DOI [10.1038/nature11233, DOI 10.1038/NATURE11233]