Dataset for characterization of thrombospondin family in chum salmon (Oncorhynchus keta)

被引：0

作者：

Lee, Sang Yoon ^{[1
]}

Kim, Yi Kyung ^{[1
]}

机构：

[1] Gangneung Wonju Natl Univ, Kangnung, South Korea

来源：

DATA IN BRIEF | 2019年 / 22卷

关键词：

D O I：

10.1016/j.dib.2019.01.008

中图分类号：

O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];

学科分类号：

07 ; 0710 ; 09 ;

摘要：

An extracellular matrix (ECM) is composed of multiprotein networks for stable interactions between cells. Thrombospondins (TSPs) are known to exert extracellular matrix interactions, synapse formation, angiogenesis and immune response in vertebrates. A five TSP gene family is divided into two subfamilies on basis of their domain architecture. Until recently, exploitation of diverse TSP genes in teleost has been still limitedly exemplified. Therefore, we report the cDNA structures and expression profiles for TSPs-1, 2, 3A, 3B, and 4B of chum salmon, Oncorhynchus keta. In conjunctional with bioinformatics analysis, the diverse domain structures of TSP genes are identified. In addition, the major domain, repeat and motif of TSP isoforms of chum salmon were aligned with those of other salmonid fishes. (C) 2019 The Authors. Published by Elsevier Inc.

引用

页码：866 / 870

页数：5