Whole-exome sequencing in a consanguineous Pakistani family identifies a mutational hotspot in the COL7A1 gene, causing recessive dystrophic epidermolysis bullosa

被引:2
作者
Rehman, Atta Ur [1 ]
Peter, Virginie G. [1 ]
Quinodoz, Mathieu [1 ]
Dawood, Muhammad [2 ]
Rivolta, Carlo [1 ,3 ,4 ,5 ]
机构
[1] Univ Lausanne, Dept Computat Biol, Unit Med Genet, Lausanne, Switzerland
[2] Dist Headquarter Hosp Khar, Dept Dermatol, Dist Bajaur, Khyber Pakhtunk, Pakistan
[3] Univ Leicester, Dept Genet & Genome Biol, Leicester, Leics, England
[4] Univ Hosp Basel, Inst Mol & Clin Ophthalmol Basel IOB, Clin Res Ctr, Basel, Switzerland
[5] Univ Hosp Basel, Dept Ophthalmol, Basel, Switzerland
关键词
consanguinity; dystrophic epidermolysis bullosa; Pakistan; FORMS;
D O I
10.1097/MCD.0000000000000299
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Dystrophic epidermolysis bullosa is a major form of epidermolysis bullosa and may be inherited as an autosomal dominant or recessive trait, with associated mutations in the COL7A1 gene. Here, we describe a consanguineous Pakistani family with four affected individuals suffering from recessive dystrophic epidermolysis bullosa. Exome sequencing of the proband's DNA revealed a homozygous missense variant (c.8038G>A:p.Gly2680Ser) in COL7A1 which cosegregated with disease in the family. The emergence of this particular glycine substitution in patients from diverse ethnic backgrounds such as China, United Kingdom, Poland, Iran, and Pakistan indicates that this variant most likely constitutes a recurrent mutational hotspot in the COL7A1 gene, rather than a germline mutation present at low levels in the general population.
引用
收藏
页码:86 / 89
页数:4
相关论文
共 10 条
  • [1] Identical Glycine Substitution Mutations in Type VII Collagen May Underlie Both Dominant and Recessive Forms of Dystrophic Epidermolysis Bullosa
    Almaani, Noor
    Liu, Lu
    Dopping-Hepenstal, Patricia J. C.
    Lai-Cheong, Joey E.
    Wong, Alvin
    Nanda, Arti
    Moss, Celia
    Martinez, Anna E.
    Mellerio, Jemima E.
    McGrath, John A.
    [J]. ACTA DERMATO-VENEREOLOGICA, 2011, 91 (03) : 262 - 266
  • [2] Epidemiology of Inherited Epidermolysis Bullosa Based on Incidence and Prevalence Estimates From the National Epidermolysis Bullosa Registry
    Fine, Jo-David
    [J]. JAMA DERMATOLOGY, 2016, 152 (11) : 1231 - 1238
  • [3] Identical COL71A1 heterozygous mutations resulting in different dystrophic epidermolysis bullosa phenotypes
    Knopfel, Nicole
    Noguera-Morel, Lucero
    Hernandez-Martin, Angela
    Garcia-Martin, Adela
    Garcia, Marta
    Mencia, Angeles
    Maseda Pedrero, Rocio
    de Lucas, Raul
    Jose Escamez, Maria
    Torrelo, Antonio
    [J]. PEDIATRIC DERMATOLOGY, 2018, 35 (02) : E94 - E98
  • [4] Analysis of protein-coding genetic variation in 60,706 humans
    Lek, Monkol
    Karczewski, Konrad J.
    Minikel, Eric V.
    Samocha, Kaitlin E.
    Banks, Eric
    Fennell, Timothy
    O'Donnell-Luria, Anne H.
    Ware, James S.
    Hill, Andrew J.
    Cummings, Beryl B.
    Tukiainen, Taru
    Birnbaum, Daniel P.
    Kosmicki, Jack A.
    Duncan, Laramie E.
    Estrada, Karol
    Zhao, Fengmei
    Zou, James
    Pierce-Hollman, Emma
    Berghout, Joanne
    Cooper, David N.
    Deflaux, Nicole
    DePristo, Mark
    Do, Ron
    Flannick, Jason
    Fromer, Menachem
    Gauthier, Laura
    Goldstein, Jackie
    Gupta, Namrata
    Howrigan, Daniel
    Kiezun, Adam
    Kurki, Mitja I.
    Moonshine, Ami Levy
    Natarajan, Pradeep
    Orozeo, Lorena
    Peloso, Gina M.
    Poplin, Ryan
    Rivas, Manuel A.
    Ruano-Rubio, Valentin
    Rose, Samuel A.
    Ruderfer, Douglas M.
    Shakir, Khalid
    Stenson, Peter D.
    Stevens, Christine
    Thomas, Brett P.
    Tiao, Grace
    Tusie-Luna, Maria T.
    Weisburd, Ben
    Won, Hong-Hee
    Yu, Dongmei
    Altshuler, David M.
    [J]. NATURE, 2016, 536 (7616) : 285 - +
  • [5] Recently Identified Forms of Epidermolysis Bullosa
    McGrath, John A.
    [J]. ANNALS OF DERMATOLOGY, 2015, 27 (06) : 658 - 666
  • [6] Pfendner EG, 2018, GeneReviews, P1
  • [7] Dystrophic Epidermolysis Bullosa: COL7A1 Mutation Landscape in a Multi-Ethnic Cohort of 152 Extended Families with High Degree of Customary Consanguineous Marriages
    Vahidnezhad, Hassan
    Youssefian, Leila
    Zeinali, Sirous
    Saeidian, Amir Hossein
    Sotoudeh, Soheila
    Mozafari, Nikoo
    Abiri, Maryam
    Kajbafzadeh, Abdol-Mohammad
    Barzegar, Mohammadreza
    Ertel, Adam
    Fortina, Paolo
    Uitto, Jouni
    [J]. JOURNAL OF INVESTIGATIVE DERMATOLOGY, 2017, 137 (03) : 660 - 669
  • [8] Novel and recurrent COL7A1 mutation in a Polish population
    Wertheim-Tysarowska, Katarzyna
    Sobczynska-Tomaszewska, Agnieszka
    Kowalewski, Cezary
    Kutkowska-Kazmierczak, Anna
    Wozniak, Katarzyna
    Niepokoj, Katarzyna
    Klausegger, Alfred
    Sypniewska-Jutkiewicz, Joanna
    Stepien, Anna
    Bal, Jerzy
    [J]. EUROPEAN JOURNAL OF DERMATOLOGY, 2012, 22 (01) : 23 - 28
  • [9] Yan YS, 2018, ANN CLIN LAB SCI, V48, P100
  • [10] Development of a clinical diagnostic matrix for characterizing inherited epidermolysis bullosa
    Yenamandra, V. K.
    Moss, C.
    Sreenivas, V.
    Khan, M.
    Sivasubbu, S.
    Sharma, V. K.
    Sethuraman, G.
    [J]. BRITISH JOURNAL OF DERMATOLOGY, 2017, 176 (06) : 1624 - 1632