Whole-exome sequencing in a consanguineous Pakistani family identifies a mutational hotspot in the COL7A1 gene, causing recessive dystrophic epidermolysis bullosa

被引:3
作者
Rehman, Atta Ur [1 ]
Peter, Virginie G. [1 ]
Quinodoz, Mathieu [1 ]
Dawood, Muhammad [2 ]
Rivolta, Carlo [1 ,3 ,4 ,5 ]
机构
[1] Univ Lausanne, Dept Computat Biol, Unit Med Genet, Lausanne, Switzerland
[2] Dist Headquarter Hosp Khar, Dept Dermatol, Dist Bajaur, Khyber Pakhtunk, Pakistan
[3] Univ Leicester, Dept Genet & Genome Biol, Leicester, Leics, England
[4] Univ Hosp Basel, Inst Mol & Clin Ophthalmol Basel IOB, Clin Res Ctr, Basel, Switzerland
[5] Univ Hosp Basel, Dept Ophthalmol, Basel, Switzerland
关键词
consanguinity; dystrophic epidermolysis bullosa; Pakistan; FORMS;
D O I
10.1097/MCD.0000000000000299
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Dystrophic epidermolysis bullosa is a major form of epidermolysis bullosa and may be inherited as an autosomal dominant or recessive trait, with associated mutations in the COL7A1 gene. Here, we describe a consanguineous Pakistani family with four affected individuals suffering from recessive dystrophic epidermolysis bullosa. Exome sequencing of the proband's DNA revealed a homozygous missense variant (c.8038G>A:p.Gly2680Ser) in COL7A1 which cosegregated with disease in the family. The emergence of this particular glycine substitution in patients from diverse ethnic backgrounds such as China, United Kingdom, Poland, Iran, and Pakistan indicates that this variant most likely constitutes a recurrent mutational hotspot in the COL7A1 gene, rather than a germline mutation present at low levels in the general population.
引用
收藏
页码:86 / 89
页数:4
相关论文
共 10 条
[1]   Identical Glycine Substitution Mutations in Type VII Collagen May Underlie Both Dominant and Recessive Forms of Dystrophic Epidermolysis Bullosa [J].
Almaani, Noor ;
Liu, Lu ;
Dopping-Hepenstal, Patricia J. C. ;
Lai-Cheong, Joey E. ;
Wong, Alvin ;
Nanda, Arti ;
Moss, Celia ;
Martinez, Anna E. ;
Mellerio, Jemima E. ;
McGrath, John A. .
ACTA DERMATO-VENEREOLOGICA, 2011, 91 (03) :262-266
[2]   Epidemiology of Inherited Epidermolysis Bullosa Based on Incidence and Prevalence Estimates From the National Epidermolysis Bullosa Registry [J].
Fine, Jo-David .
JAMA DERMATOLOGY, 2016, 152 (11) :1231-1238
[3]   Identical COL71A1 heterozygous mutations resulting in different dystrophic epidermolysis bullosa phenotypes [J].
Knopfel, Nicole ;
Noguera-Morel, Lucero ;
Hernandez-Martin, Angela ;
Garcia-Martin, Adela ;
Garcia, Marta ;
Mencia, Angeles ;
Maseda Pedrero, Rocio ;
de Lucas, Raul ;
Jose Escamez, Maria ;
Torrelo, Antonio .
PEDIATRIC DERMATOLOGY, 2018, 35 (02) :E94-E98
[4]   Analysis of protein-coding genetic variation in 60,706 humans [J].
Lek, Monkol ;
Karczewski, Konrad J. ;
Minikel, Eric V. ;
Samocha, Kaitlin E. ;
Banks, Eric ;
Fennell, Timothy ;
O'Donnell-Luria, Anne H. ;
Ware, James S. ;
Hill, Andrew J. ;
Cummings, Beryl B. ;
Tukiainen, Taru ;
Birnbaum, Daniel P. ;
Kosmicki, Jack A. ;
Duncan, Laramie E. ;
Estrada, Karol ;
Zhao, Fengmei ;
Zou, James ;
Pierce-Hollman, Emma ;
Berghout, Joanne ;
Cooper, David N. ;
Deflaux, Nicole ;
DePristo, Mark ;
Do, Ron ;
Flannick, Jason ;
Fromer, Menachem ;
Gauthier, Laura ;
Goldstein, Jackie ;
Gupta, Namrata ;
Howrigan, Daniel ;
Kiezun, Adam ;
Kurki, Mitja I. ;
Moonshine, Ami Levy ;
Natarajan, Pradeep ;
Orozeo, Lorena ;
Peloso, Gina M. ;
Poplin, Ryan ;
Rivas, Manuel A. ;
Ruano-Rubio, Valentin ;
Rose, Samuel A. ;
Ruderfer, Douglas M. ;
Shakir, Khalid ;
Stenson, Peter D. ;
Stevens, Christine ;
Thomas, Brett P. ;
Tiao, Grace ;
Tusie-Luna, Maria T. ;
Weisburd, Ben ;
Won, Hong-Hee ;
Yu, Dongmei ;
Altshuler, David M. .
NATURE, 2016, 536 (7616) :285-+
[5]   Recently Identified Forms of Epidermolysis Bullosa [J].
McGrath, John A. .
ANNALS OF DERMATOLOGY, 2015, 27 (06) :658-666
[6]  
Pfendner EG, 2018, GeneReviews, P1
[7]   Dystrophic Epidermolysis Bullosa: COL7A1 Mutation Landscape in a Multi-Ethnic Cohort of 152 Extended Families with High Degree of Customary Consanguineous Marriages [J].
Vahidnezhad, Hassan ;
Youssefian, Leila ;
Zeinali, Sirous ;
Saeidian, Amir Hossein ;
Sotoudeh, Soheila ;
Mozafari, Nikoo ;
Abiri, Maryam ;
Kajbafzadeh, Abdol-Mohammad ;
Barzegar, Mohammadreza ;
Ertel, Adam ;
Fortina, Paolo ;
Uitto, Jouni .
JOURNAL OF INVESTIGATIVE DERMATOLOGY, 2017, 137 (03) :660-669
[8]   Novel and recurrent COL7A1 mutation in a Polish population [J].
Wertheim-Tysarowska, Katarzyna ;
Sobczynska-Tomaszewska, Agnieszka ;
Kowalewski, Cezary ;
Kutkowska-Kazmierczak, Anna ;
Wozniak, Katarzyna ;
Niepokoj, Katarzyna ;
Klausegger, Alfred ;
Sypniewska-Jutkiewicz, Joanna ;
Stepien, Anna ;
Bal, Jerzy .
EUROPEAN JOURNAL OF DERMATOLOGY, 2012, 22 (01) :23-28
[9]  
Yan YS, 2018, ANN CLIN LAB SCI, V48, P100
[10]   Development of a clinical diagnostic matrix for characterizing inherited epidermolysis bullosa [J].
Yenamandra, V. K. ;
Moss, C. ;
Sreenivas, V. ;
Khan, M. ;
Sivasubbu, S. ;
Sharma, V. K. ;
Sethuraman, G. .
BRITISH JOURNAL OF DERMATOLOGY, 2017, 176 (06) :1624-1632