Polymorphism in 2,6-dimethylpyridinium tetrachlorocuprate(II): Theoretical and crystallographic studies

被引:16
作者
Awwadi, Firas F. [1 ]
Haddad, Salim F. [1 ]
机构
[1] Univ Jordan, Dept Chem, Amman 11942, Jordan
关键词
Polymorphism; Copper complexes; DFT calculations; Electrostatic potential; HALIDE ION SYNTHON; CRYSTAL-STRUCTURES; HALOGEN BONDS; CONFORMATIONAL POLYMORPHISM; INTERMOLECULAR INTERACTIONS; TETRAHALOCUPRATE(II) IONS; MOLECULES; COMPLEXES;
D O I
10.1016/j.molstruc.2012.04.015
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
A new polymorph of 2,6-dimethylpyridinium tetrachlorocuprate(II) has been prepared. The previously reported structure crystallizes in the Pbcn space group (henceforth polymorph I), while the one reported in this paper crystallizes in the C2/c space group. The N-H center dot center dot center dot Cl hydrogen bonding interactions connect the cations and anions to form the structural unit in the two polymorphs. The supramolecular structure of the two polymorphs is developed based upon N(pi)center dot center dot center dot Cl and non-classical C-H center dot center dot center dot Cl hydrogen bonding interactions. The role of the N(pi)center dot center dot center dot Cl is dominant in polymorph I. In contrast, the supramolecular structure of polymorph II is dominated by the C-H center dot center dot center dot Cl hydrogen bonding interactions. The calculated electrostatic potential was used to rationalize the arrangement of the supramolecular synthons within the crystalline lattices and the hierarchy of the intermolecular interactions. The second difference between the two polymorphs is that the trans Cl-Cu-Cl angles are larger in polymorph-II than polymorph I by similar to 11 degrees, resulting in a more flattened geometry for the [CuCl4](2-) anions. DFT/B3LYP calculations indicate that the Cl-Cu-Cl angle in the [CuCl4](2-) anion is flexible. Although the average difference in the trans Cl-Cu-Cl angles is reasonably large between the two polymorphs, the difference in their energies, estimated at the complete basis set level, is negligibly small (4 kJ/mol). Also, calculations showed that the preferred geometry for the [CuCl4](2-) anion is flattened tetrahedral with a mean trans angles around 127 degrees, estimated at complete basis set level. These predicted geometries by calculations agree with experimental results based upon published crystal structures in the Cambridge Structural Database (CSD). (C) 2012 Elsevier B.V. All rights reserved.
引用
收藏
页码:28 / 32
页数:5
相关论文
共 29 条
[1]   Bis(2,6-dimethylpyridinium) tetrabromidocobaltate(II) [J].
Ali, Basem Fares ;
Al-Far, Rawhi H. ;
Haddad, Salim F. .
ACTA CRYSTALLOGRAPHICA SECTION E-STRUCTURE REPORTS ONLINE, 2008, 64 :M485-U508
[2]   Hydrogen Bonded, π•••π Stacked and X•••π Framework Structures in Bis(2,6-Lutidinium) Tetrahalocuprate(II) Complexes [J].
Ali, Basem Fares ;
Al-Far, Rawhi ;
Haddad, Salim F. .
JOURNAL OF CHEMICAL CRYSTALLOGRAPHY, 2010, 40 (08) :696-701
[3]  
[Anonymous], 2002, SHELXTL XPREP XL XP
[4]   Halogen bonds in biological molecules [J].
Auffinger, P ;
Hays, FA ;
Westhof, E ;
Ho, PS .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2004, 101 (48) :16789-16794
[5]   Tuning Molecular Structures Using Weak Noncovalent Interactions: Theoretical Study and Structure of trans-Bis(2-chloropyridine)dihalocopper(II) and trans-Bis(3-chloropyridine)dibromocopper(II) [J].
Awwadi, Firas ;
Willett, Roger D. ;
Twamley, Brendan .
CRYSTAL GROWTH & DESIGN, 2011, 11 (12) :5316-5323
[6]   The nature of Halogen•••Halide synthons:: Theoretical and crystallographic studies [J].
Awwadi, Firas F. ;
Willett, Roger D. ;
Peterson, Kirk A. ;
Twamley, Brendan .
JOURNAL OF PHYSICAL CHEMISTRY A, 2007, 111 (12) :2319-2328
[7]   The aryl chlorine-halide ion synthon and its role in the control of the crystal structures of tetrahalocuprate(II) ions [J].
Awwadi, Firas F. ;
Willett, Roger D. ;
Twamley, Brendan .
CRYSTAL GROWTH & DESIGN, 2007, 7 (04) :624-632
[8]   The electrostatic nature of aryl-bromine-halide synthons:: The role of aryl-bromine-halide synthons in the crystal structures of the trans-bis(2-bromopyridine)dihalocopper(II) and trans-bis(3-bromopyridine)dihalocopper(II) complexes [J].
Awwadi, Firas F. ;
Willett, Roger D. ;
Haddad, Salim F. ;
Twamley, Brendan .
CRYSTAL GROWTH & DESIGN, 2006, 6 (08) :1833-1838
[9]   The nature of halogen ... halogen synthons: Crystallographic and theoretical studies [J].
Awwadi, Firas F. ;
Willett, Roger D. ;
Peterson, Kirk A. ;
Twamley, Brendan .
CHEMISTRY-A EUROPEAN JOURNAL, 2006, 12 (35) :8952-8960
[10]  
Awwadi FF, 2011, JORDAN J CHEM, V6, P175