Genetic characterization and molecular epidemiology of foot-and-mouth disease viruses isolated from Afghanistan in 2003-2005

被引：40

作者：

Schumann, Kate R. ^{[1
]}

Knowles, Nick J. ^{[2
]}

Davies, Paul R. ^{[2
]}

Midgley, Rebecca J. ^{[2
]}

Valarcher, Jean-Francois ^{[2
]}

Raoufi, Abdul Quader ^{[3
]}

McKenna, Thomas S. ^{[1
]}

Hurtle, William ^{[4
]}

Burans, James P. ^{[5
]}

Martin, Barbara M. ^{[6
]}

Rodriguez, Luis L. ^{[7
]}

Beckham, Tammy R. ^{[1
]}

机构：

[1] USDA, Foreign Anim Dis Diagnos, Natl Vet Serv Labs, Vet Serv,Anim & Plant Hlth Inspect Serv,Plum Isla, Orient Point, NY 11957 USA

[2] Inst Food Res, Inst Anim Hlth, Pirbright Lab, Inst Anim Hlth, Woking GU24 0NF, Surrey, England

[3] Minist Agr & Anim Husbandry, Kabul, Afghanistan

[4] Plum Isl Anim Dis Ctr, Dept Homeland Secur, Orient Point, NY 11957 USA

[5] Dept Homeland Secur, Frederick, MD 21703 USA

[6] USDA, Vet Serv, Natl Vet Serv Labs, Anim & Plant Hlth Inspect Serv, Ames, IA 50010 USA

[7] USDA ARS, Plum Isl Anim Dis Ctr, Orient Point, NY 11957 USA

来源：

VIRUS GENES | 2008年 / 36卷 / 02期

基金：

英国科研创新办公室;

关键词：

FMDV; VP1; phylogenetic analysis; nucleotide; amino acid; Afghanistan;

D O I：

10.1007/s11262-008-0206-4

中图分类号：

Q3 [遗传学];

学科分类号：

071007 ; 090102 ;

摘要：

Foot-and-mouth disease virus (FMDV) isolates collected from various geographic locations in Afghanistan between 2003 and 2005 were genetically characterized, and their phylogeny was reconstructed utilizing nucleotide sequences of the complete VP1 coding region. Three serotypes of FMDV (types A, O, and Asia 1) were identified as causing clinical disease in Afghanistan during this period. Phylogenetic analysis revealed that the type A viruses were most closely related to isolates collected in Iran during 2002-2004. This is the first published report of serotype A in Afghanistan since 1975, therefore indicating the need for inclusion of serotype A in vaccine formulations that will be used to control disease outbreaks in this country. Serotype O virus isolates were closely related to PanAsia strains, including those that originated from Bhutan and Nepal during 2003-2004. The Asia 1 viruses, collected along the northern and eastern borders of Afghanistan, were most closely related to FMDV isolates collected in Pakistan during 2003 and 2004. Data obtained from this study provide valuable information on the FMDV serotypes circulating in Afghanistan and their genetic relationship with strains causing FMD in neighboring countries.

引用

页码：401 / 413

页数：13

共 30 条

[1] THE 3-DIMENSIONAL STRUCTURE OF FOOT-AND-MOUTH-DISEASE VIRUS AT 2.9-A RESOLUTION [J].

ACHARYA, R ;

FRY, E ;

STUART, D ;

FOX, G ;

ROWLANDS, D ;

BROWN, F .

NATURE, 1989, 337 (6209) :709-716

[2] GENETIC-RELATIONSHIPS BETWEEN FOOT-AND-MOUTH-DISEASE TYPE ASIA-1 VIRUSES [J].

ANSELL, DM ;

SAMUEL, AR ;

CARPENTER, WC ;

KNOWLES, NJ .

EPIDEMIOLOGY AND INFECTION, 1994, 112 (01) :213-224

[3] FOOT-AND-MOUTH DISEASE [J].

BACHRACH, HL .

ANNUAL REVIEW OF MICROBIOLOGY, 1968, 22 :201-+

[4] Use of a portable real-time reverse transcriptase-polymerase chain reaction assay for rapid detection of foot-and-mouth disease virus [J].

Callahan, JD ;

Brown, F ;

Csorio, FA ;

Sur, JH ;

Kramer, E ;

Long, GW ;

Lubroth, J ;

Ellis, SJ ;

Shoulars, KS ;

Gaffney, KL ;

Rock, DL ;

Nelson, WM .

JOURNAL OF THE AMERICAN VETERINARY MEDICAL ASSOCIATION, 2002, 220 (11) :1636-1642

[5] Comparative genomics of foot-and-mouth disease virus [J].

Carrillo, C ;

Tulman, ER ;

Delhon, G ;

Lu, Z ;

Carreno, A ;

Vagnozzi, A ;

Kutish, GF ;

Rock, DL .

JOURNAL OF VIROLOGY, 2005, 79 (10) :6487-6504

[6] COMPLEMENT FIXATION TECHNIQUE FOR QUANTITATIVE MEASUREMENT OF ANTIGENIC DIFFERENCES BETWEEN STRAINS OF VIRUS OF FOOT-+-MOUTH DISEASE [J].

DAVIE, J .

JOURNAL OF HYGIENE, 1964, 62 (04) :401-&

[7] Evolution of foot-and-mouth disease virus [J].

Domingo, E ;

Escarmís, C ;

Baranowski, E ;

Ruiz-Jarabo, CM ;

Carrillo, E ;

Núñez, JI ;

Sobrino, F .

VIRUS RESEARCH, 2003, 91 (01) :47-63

[8]

Ferris N P, 1992, Rev Sci Tech, V11, P657

[9] Emergence of a new strain of type O foot-and-mouth disease virus: Its phylogenetic and evolutionary relationship with the PanAsia pandemic strain [J].

Hemadri, D ;

Tosh, C ;

Sanyal, A ;

Venkataramanan, R .

VIRUS GENES, 2002, 25 (01) :23-34

[10]

Kitching RP, 2005, CURR TOP MICROBIOL, V288, P133

← 1 2 3 →