Long-term unsustainable patterns of development rather than recent deforestation caused the emergence of Orthocoronavirinae species

被引:1
作者
Ribeiro, Servio P. [1 ]
Barh, Debmalya [2 ,3 ]
Andrade, Bruno Silva [4 ]
Santana Silva, Raner Jose [5 ,6 ]
Costa-Rezende, Diogo Henrique [7 ]
Camargos Fonseca, Paula Luize [8 ]
Tiwari, Sandeep [3 ]
Giovanetti, Marta [9 ,10 ]
Junior Alcantara, Luiz Carlos [9 ,10 ]
Azevedo, Vasco Ariston [3 ]
Ghosh, Preetam [11 ]
Diniz-Filho, Jose Alexandre F. [12 ]
Loyola, Rafael [12 ,13 ]
Brito de Almeida, Maria Fernanda [1 ,14 ]
Goes-Neto, Aristoteles [15 ]
机构
[1] Univ Fed Ouro Preto, Lab Ecol Adoecimento & Florestas NUPEB ICEB, Campus Morro Cruzeiro, Ouro Preto, MG, Brazil
[2] Ctr Genom & Appl Gene Technol, Inst Integrat Omics & Appl Biotechnol IIOAB, Purba Medinipur, W Bengal, India
[3] Univ Fed Minas Gerais, Inst Ciancias Biol, Dept Genet Ecol & Evolucao, Belo Horizonte, MG, Brazil
[4] Univ Estadual Sudoeste Bahia UESB, Dept Ciancias Biol, Lab Bioinformat & Quim Computac, Jequie, BA, Brazil
[5] Univ Estadual Santa Cruz UESC, Dept Ciancias Biol DCB, Ilheus, BA, Brazil
[6] Univ Estadual Santa Cruz UESC, Programa Posgrad Genet & Biol Mol PPGGBM, Ilheus, BA, Brazil
[7] Univ Estadual Feira Santana UEFS, Dept Ciancias Biol, Programa Posgrad Bot PPGBot, Feira De Santana, BA, Brazil
[8] Univ Fed Minas Gerais, Inst Ciancias Biol, Dept Microbiol, Belo Horizonte, MG, Brazil
[9] Univ Fed Minas Gerais, Lab Genet Celular & Mol, Belo Horizonte, MG, Brazil
[10] Inst Oswaldo Cruz Fiocruz, Lab Flavivfrus, Rio De Janeiro, RJ, Brazil
[11] Virginia Commonwealth Univ, Richmond, VA USA
[12] Univ Fed Goias, Dept Ecol, Goiania, Go, Brazil
[13] Fundacao Brasileira Desenvolvimento Sustentavel, Rio De Janeiro, RJ, Brazil
[14] Univ Fed Vicosa, Programa Posgrad Ecol, Vicosa, MG, Brazil
[15] Univ Fed Minas Gerais, Inst Ciencias Biol, Lab Biol Mol & Computat Fungos, Belo Horizonte, MG, Brazil
关键词
MULTIPLE SEQUENCE ALIGNMENT; BIODIVERSITY; ECOLOGY; CORONAVIRUSES; DISEASE; BATS; THREATS; ORIGIN; HOST;
D O I
10.1111/1462-2920.16121
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
We investigated whether a set of phylogeographical tracked emergent events of Orthocoronavirinae were related to developed, urban and polluted environments worldwide. We explored coronavirus records in response to climate (rainfall parameters), population density, CO2 emission, Human Developmental Index (HDI) and deforestation. We contrasted environmental characteristics from regions with spillovers or encounters of wild Orthocoronavirinae against adjacent areas having best-preserved conditions. We used all complete sequenced CoVs genomes deposited in NCBI and GISAID databases until January 2021. Except for Deltacoronavirus, concentrated in Hong Kong and in birds, the other three genera were scattered all over the planet, beyond the original distribution of the subfamily, and found in humans, mammals, fishes and birds, wild or domestic. Spillovers and presence in wild animals were only reported in developed/densely populated places. We found significantly more occurrences reported in places with higher HDI, CO2 emission, or population density, along with more rainfall and more accentuated seasonality. Orthocoronavirinae occurred in areas with significantly higher human populations, CO2 emissions and deforestation rates than in adjacent locations. Intermediately disturbed ecosystems seemed more vulnerable for Orthocoronavirinae emergence than forested regions in frontiers of deforestation. Sadly, people experiencing poverty in an intensely consumerist society are the most vulnerable.
引用
收藏
页码:4714 / 4724
页数:11
相关论文
共 53 条
  • [21] Chimpanzee reservoirs of pandemic and nonpandemic HIV-1
    Keele, Brandon F.
    Van Heuverswyn, Fran
    Li, Yingying
    Bailes, Elizabeth
    Takehisa, Jun
    Santiago, Mario L.
    Bibollet-Ruche, Frederic
    Chen, Yalu
    Wain, Louise V.
    Liegeois, Florian
    Loul, Severin
    Ngole, Eitel Mpoudi
    Bienvenue, Yanga
    Delaporte, Eric
    Brookfield, John F. Y.
    Sharp, Paul M.
    Shaw, George M.
    Peeters, Martine
    Hahn, Beatrice H.
    [J]. SCIENCE, 2006, 313 (5786) : 523 - 526
  • [22] Impacts of biodiversity and biodiversity loss on zoonotic diseases
    Keesing, Felicia
    Ostfeld, Richard S.
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2021, 118 (17)
  • [23] PartitionFinder 2: New Methods for Selecting Partitioned Models of Evolution for Molecular and Morphological Phylogenetic Analyses
    Lanfear, Robert
    Frandsen, Paul B.
    Wright, April M.
    Senfeld, Tereza
    Calcott, Brett
    [J]. MOLECULAR BIOLOGY AND EVOLUTION, 2017, 34 (03) : 772 - 773
  • [24] Latinne Alice, 2020, Nat Commun, V11, P4235, DOI [10.1101/2020.05.31.116061, 10.1038/s41467-020-17687-3]
  • [25] Composition and divergence of coronavirus spike proteins and host ACE2 receptors predict potential intermediate hosts of SARS-CoV-2
    Liu, Zhixin
    Xiao, Xiao
    Wei, Xiuli
    Li, Jian
    Yang, Jing
    Tan, Huabing
    Zhu, Jianyong
    Zhang, Qiwei
    Wu, Jianguo
    Liu, Long
    [J]. JOURNAL OF MEDICAL VIROLOGY, 2020, 92 (06) : 595 - 601
  • [26] Fundamental evolution of all Orthocoronavirinae including three deadly lineages descendent from Chiroptera-hosted coronaviruses: SARS-CoV, MERS-CoV and SARS-CoV-2
    Machado, Denis Jacob
    Scott, Rachel
    Guirales, Sayal
    Janies, Daniel A.
    [J]. CLADISTICS, 2021, 37 (05) : 461 - 488
  • [27] WHO REPORT INTO COVID ORIGINS ZEROES IN ON ANIMAL MARKETS
    Maxmen, Amy
    [J]. NATURE, 2021, 592 (7853) : 173 - 174
  • [28] DETECTING DISEASE AND PARASITE THREATS TO ENDANGERED SPECIES AND ECOSYSTEMS
    MCCALLUM, H
    DOBSON, A
    [J]. TRENDS IN ECOLOGY & EVOLUTION, 1995, 10 (05) : 190 - 194
  • [29] Megevand C, 2013, DIR DEV, P1, DOI 10.1596/978-0-8213-9742-8
  • [30] Mildenstein T., 2015, BATS ANTHROPOCENE CO