Fitness effects of altering gene expression noise in Saccharomyces cerevisiae
被引:39
作者:
Duveau, Fabien
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机构:
Univ Michigan, Dept Ecol & Evolutionary Biol, Ann Arbor, MI 48109 USA
Univ Paris Diderot, CNRS UMR 7057, Lab Matiere & Syst Complexes, Paris, FranceUniv Michigan, Dept Ecol & Evolutionary Biol, Ann Arbor, MI 48109 USA
Duveau, Fabien
[1
,2
]
Hodgins-Davis, Andrea
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机构:
Univ Michigan, Dept Ecol & Evolutionary Biol, Ann Arbor, MI 48109 USAUniv Michigan, Dept Ecol & Evolutionary Biol, Ann Arbor, MI 48109 USA
Hodgins-Davis, Andrea
[1
]
Metzger, Brian P. H.
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h-index: 0
机构:
Univ Michigan, Dept Ecol & Evolutionary Biol, Ann Arbor, MI 48109 USA
Univ Chicago, Dept Ecol & Evolut, 940 E 57Th St, Chicago, IL 60637 USAUniv Michigan, Dept Ecol & Evolutionary Biol, Ann Arbor, MI 48109 USA
Metzger, Brian P. H.
[1
,3
]
Yang, Bing
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h-index: 0
机构:
Univ Michigan, Dept Mol Cellular & Dev Biol, Ann Arbor, MI 48109 USAUniv Michigan, Dept Ecol & Evolutionary Biol, Ann Arbor, MI 48109 USA
Yang, Bing
[4
]
Tryban, Stephen
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机构:
Univ Michigan, Dept Ecol & Evolutionary Biol, Ann Arbor, MI 48109 USAUniv Michigan, Dept Ecol & Evolutionary Biol, Ann Arbor, MI 48109 USA
Tryban, Stephen
[1
]
Walker, Elizabeth A.
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h-index: 0
机构:
Univ Michigan, Dept Ecol & Evolutionary Biol, Ann Arbor, MI 48109 USAUniv Michigan, Dept Ecol & Evolutionary Biol, Ann Arbor, MI 48109 USA
Walker, Elizabeth A.
[1
]
Lybrook, Tricia
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机构:
Univ Michigan, Dept Ecol & Evolutionary Biol, Ann Arbor, MI 48109 USAUniv Michigan, Dept Ecol & Evolutionary Biol, Ann Arbor, MI 48109 USA
Lybrook, Tricia
[1
]
Wittkopp, Patricia J.
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h-index: 0
机构:
Univ Michigan, Dept Ecol & Evolutionary Biol, Ann Arbor, MI 48109 USA
Univ Michigan, Dept Mol Cellular & Dev Biol, Ann Arbor, MI 48109 USAUniv Michigan, Dept Ecol & Evolutionary Biol, Ann Arbor, MI 48109 USA
Wittkopp, Patricia J.
[1
,4
]
机构:
[1] Univ Michigan, Dept Ecol & Evolutionary Biol, Ann Arbor, MI 48109 USA
[2] Univ Paris Diderot, CNRS UMR 7057, Lab Matiere & Syst Complexes, Paris, France
[3] Univ Chicago, Dept Ecol & Evolut, 940 E 57Th St, Chicago, IL 60637 USA
[4] Univ Michigan, Dept Mol Cellular & Dev Biol, Ann Arbor, MI 48109 USA
Gene expression noise is an evolvable property of biological systems that describes differences in expression among genetically identical cells in the same environment. Prior work has shown that expression noise is heritable and can be shaped by selection, but the impact of variation in expression noise on organismal fitness has proven difficult to measure. Here, we quantify the fitness effects of altering expression noise for the TDH3 gene in Saccharomyces cerevisiae. We show that increases in expression noise can be deleterious or beneficial depending on the difference between the average expression level of a genotype and the expression level maximizing fitness. We also show that a simple model relating single-cell expression levels to population growth produces patterns consistent with our empirical data. We use this model to explore a broad range of average expression levels and expression noise, providing additional insight into the fitness effects of variation in expression noise.
机构:
LNEG, Unit Bioenergy, Estr Paco Lumiar 22, P-1649038 Lisbon, PortugalLNEG, Unit Bioenergy, Estr Paco Lumiar 22, P-1649038 Lisbon, Portugal
Branco, Patricia
Francisco, Diana
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机构:
LNEG, Unit Bioenergy, Estr Paco Lumiar 22, P-1649038 Lisbon, PortugalLNEG, Unit Bioenergy, Estr Paco Lumiar 22, P-1649038 Lisbon, Portugal
Francisco, Diana
Chambon, Christophe
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机构:
INRA, Plate Forme Explorat Metab Composante Proteom, F-63122 St Genes Champanelle, FranceLNEG, Unit Bioenergy, Estr Paco Lumiar 22, P-1649038 Lisbon, Portugal
Chambon, Christophe
Hebraud, Michel
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机构:
INRA, Plate Forme Explorat Metab Composante Proteom, F-63122 St Genes Champanelle, FranceLNEG, Unit Bioenergy, Estr Paco Lumiar 22, P-1649038 Lisbon, Portugal
Hebraud, Michel
Arneborg, Nils
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机构:
Univ Copenhagen, Fac Sci, Dept Food Sci, DK-1958 Frederiksberg C, DenmarkLNEG, Unit Bioenergy, Estr Paco Lumiar 22, P-1649038 Lisbon, Portugal
Arneborg, Nils
Almeida, Maria Gabriela
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机构:
UNL, Fac Ciencias & Tecnol, Dept Quim, REQUIMTE, P-2829516 Monte De Caparica, Portugal
Inst Super Saude Egas Moniz, P-2829511 Monte De Caparica, PortugalLNEG, Unit Bioenergy, Estr Paco Lumiar 22, P-1649038 Lisbon, Portugal
Almeida, Maria Gabriela
Caldeira, Jorge
论文数: 0引用数: 0
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机构:
UNL, Fac Ciencias & Tecnol, Dept Quim, REQUIMTE, P-2829516 Monte De Caparica, Portugal
Inst Super Saude Egas Moniz, P-2829511 Monte De Caparica, PortugalLNEG, Unit Bioenergy, Estr Paco Lumiar 22, P-1649038 Lisbon, Portugal
Caldeira, Jorge
Albergaria, Helena
论文数: 0引用数: 0
h-index: 0
机构:
LNEG, Unit Bioenergy, Estr Paco Lumiar 22, P-1649038 Lisbon, PortugalLNEG, Unit Bioenergy, Estr Paco Lumiar 22, P-1649038 Lisbon, Portugal
机构:
LNEG, Unit Bioenergy, Estr Paco Lumiar 22, P-1649038 Lisbon, PortugalLNEG, Unit Bioenergy, Estr Paco Lumiar 22, P-1649038 Lisbon, Portugal
Branco, Patricia
Francisco, Diana
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h-index: 0
机构:
LNEG, Unit Bioenergy, Estr Paco Lumiar 22, P-1649038 Lisbon, PortugalLNEG, Unit Bioenergy, Estr Paco Lumiar 22, P-1649038 Lisbon, Portugal
Francisco, Diana
Chambon, Christophe
论文数: 0引用数: 0
h-index: 0
机构:
INRA, Plate Forme Explorat Metab Composante Proteom, F-63122 St Genes Champanelle, FranceLNEG, Unit Bioenergy, Estr Paco Lumiar 22, P-1649038 Lisbon, Portugal
Chambon, Christophe
Hebraud, Michel
论文数: 0引用数: 0
h-index: 0
机构:
INRA, Plate Forme Explorat Metab Composante Proteom, F-63122 St Genes Champanelle, FranceLNEG, Unit Bioenergy, Estr Paco Lumiar 22, P-1649038 Lisbon, Portugal
Hebraud, Michel
Arneborg, Nils
论文数: 0引用数: 0
h-index: 0
机构:
Univ Copenhagen, Fac Sci, Dept Food Sci, DK-1958 Frederiksberg C, DenmarkLNEG, Unit Bioenergy, Estr Paco Lumiar 22, P-1649038 Lisbon, Portugal
Arneborg, Nils
Almeida, Maria Gabriela
论文数: 0引用数: 0
h-index: 0
机构:
UNL, Fac Ciencias & Tecnol, Dept Quim, REQUIMTE, P-2829516 Monte De Caparica, Portugal
Inst Super Saude Egas Moniz, P-2829511 Monte De Caparica, PortugalLNEG, Unit Bioenergy, Estr Paco Lumiar 22, P-1649038 Lisbon, Portugal
Almeida, Maria Gabriela
Caldeira, Jorge
论文数: 0引用数: 0
h-index: 0
机构:
UNL, Fac Ciencias & Tecnol, Dept Quim, REQUIMTE, P-2829516 Monte De Caparica, Portugal
Inst Super Saude Egas Moniz, P-2829511 Monte De Caparica, PortugalLNEG, Unit Bioenergy, Estr Paco Lumiar 22, P-1649038 Lisbon, Portugal
Caldeira, Jorge
Albergaria, Helena
论文数: 0引用数: 0
h-index: 0
机构:
LNEG, Unit Bioenergy, Estr Paco Lumiar 22, P-1649038 Lisbon, PortugalLNEG, Unit Bioenergy, Estr Paco Lumiar 22, P-1649038 Lisbon, Portugal