Investigation on the Interaction of Dabrafenib with Human Serum Albumin Using Combined Experiment and Molecular Dynamics Simulation: Exploring the Binding Mechanism, Esterase-like Activity, and Antioxidant Activity

被引:23
|
作者
Suo, Zili [1 ]
Xiong, Xinnuo [1 ]
Sun, Qiaomei [1 ]
Zhao, Ludan [1 ]
Tang, Peixiao [1 ]
Hou, Quan [1 ]
Zhang, Yongkui [1 ]
Wu, Di [2 ]
Li, Hui [1 ]
机构
[1] Sichuan Univ, Sch Chem Engn, Chengdu 610065, Sichuan, Peoples R China
[2] Chengdu Univ, Coll Pharm & Biol Engn, Key Lab Meat Proc Sichuan, Chengdu 610106, Sichuan, Peoples R China
基金
中国国家自然科学基金;
关键词
dabrafenib; human serum albumin; esterase-like activity; antioxidant activity; molecular dynamics simulation; FATTY-ACID; DOCKING; LIGAND; INHIBITOR; HSA; NANOPARTICLES; SITES;
D O I
10.1021/acs.molpharmaceut.8b00806
中图分类号
R-3 [医学研究方法]; R3 [基础医学];
学科分类号
1001 ;
摘要
Dabrafenib is a novel targeted antimelanoma drug. The present work explored the binding mechanism of dabrafenib-human serum albumin (HSA) and the effect on the esterase-like activity and antioxidant activity of HSA by using F-19 NMR, spectroscopy methods, and molecular dynamics simulation. The results of F-19 NMR, fluorescence, and time-resolved fluorescence spectroscopy revealed that dabrafenib spontaneously binds to the subdomain IIIA of the HSA by hydrophobic action and forms a static complex. The binding affects the esterase-like activity of HSA but not its antioxidant activity. According to the results of molecular dynamics simulation, dabrafenib interacts with Arg410 and Tyr411, which are the key residue associated with the esterase-like activity of HSA. Meanwhile, dabrafenib does not interact with Cys34, the key residue associated with the antioxidant activity of HSA. The results of circular dichroism spectroscopy and molecular dynamics simulation show that the conformation of HSA is not affected by the binding of dabrafenib. This study can provide useful information for understanding the pharmacokinetic properties of dabrafenib.
引用
收藏
页码:5637 / 5645
页数:9
相关论文
共 50 条
  • [1] Ligand binding properties and esterase-like activity of recombinant human serum albumin
    Takeshima, K
    Ohtani, W
    Sumi, A
    Ohmura, T
    YAKUGAKU ZASSHI-JOURNAL OF THE PHARMACEUTICAL SOCIETY OF JAPAN, 1996, 116 (08): : 622 - 629
  • [2] Exploring the binding mechanism and esterase-like activity of human serum albumin with levofloxacin and its choline based conjugates: A biophysical approach
    Bhat, Ab Raouf
    Patel, Rajan
    INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES, 2024, 274
  • [3] Unveiling the binding details and esterase-like activity effect of methyl yellow on human serum albumin: spectroscopic and simulation study
    Xia, Haobin
    Sun, Qiaomei
    Gan, Na
    Ai, Pu
    Li, Hui
    Li, Yanfang
    RSC ADVANCES, 2023, 13 (12) : 8281 - 8290
  • [4] Esterase-like activity of human serum albumin toward prodrug esters of nicotinic acid
    Salvi, A
    Carrupt, PA
    Mayer, JM
    Testa, B
    DRUG METABOLISM AND DISPOSITION, 1997, 25 (04) : 395 - 398
  • [5] ESTERASE-LIKE ACTIVITY OF HUMAN-SERUM ALBUMIN .3. ESTERASE-LIKE ACTIVITY OF HUMAN-SERUM ALBUMIN - ENANTIOSELECTIVITY IN THE BURST PHASE OF REACTION WITH PARA-NITROPHENYL ALPHA-METHOXYPHENYL ACETATE
    KURONO, Y
    KONDO, T
    IKEDA, K
    ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS, 1983, 227 (01) : 339 - 341
  • [6] Ligand Binding to the FA3-FA4 Cleft Inhibits the Esterase-Like Activity of Human Serum Albumin
    Ascenzi, Paolo
    Leboffe, Loris
    di Masi, Alessandra
    Trezza, Viviana
    Fanali, Gabriella
    Gioia, Magda
    Coletta, Massimo
    Fasano, Mauro
    PLOS ONE, 2015, 10 (03):
  • [7] Role of Arg-410 and Tyr-411 in human serum albumin for ligand binding and esterase-like activity
    Watanabe, H
    Tanase, S
    Nakajou, K
    Maruyama, T
    Kragh-Hansen, U
    Otagiri, M
    BIOCHEMICAL JOURNAL, 2000, 349 : 813 - 819
  • [8] DISTINCTION AND IDENTIFICATION OF DRUG-BINDING SITES ON HUMAN-SERUM ALBUMIN BY KINETIC METHOD APPLYING THE ESTERASE-LIKE ACTIVITY
    IKEDA, K
    KURONO, Y
    OZEKI, Y
    OHTA, N
    YOTSUYANAGI, T
    JOURNAL OF PHARMACOBIO-DYNAMICS, 1980, 3 (09): : S1 - &
  • [9] ESTERASE-LIKE ACTIVITY OF HUMAN-SERUM ALBUMIN TOWARD 4'-METHYLUMBELLIFERYL 4-GUANIDINOBENZOATE
    OHTA, N
    YOTSUYANAGI, T
    IKEDA, K
    JOURNAL OF PHARMACEUTICAL SCIENCES, 1987, 76 (11) : S285 - S285
  • [10] ESTERASE-LIKE ACTIVITY OF HUMAN-SERUM ALBUMIN .6. REACTION WITH PARA-NITROPHENYL GLYCINATE
    KURONO, Y
    FURUKAWA, A
    TSUJI, T
    IKEDA, K
    CHEMICAL & PHARMACEUTICAL BULLETIN, 1988, 36 (10) : 4068 - 4074