Methylobacterium terrae sp. nov., a radiation-resistant bacterium isolated from gamma ray-irradiated soil

被引:23
|
作者
Kim, Jiyoun [1 ]
Chhetri, Geeta [1 ]
Kim, Inhyup [1 ]
Kim, Hyungdong [1 ]
Kim, Myung Kyum [2 ]
Seo, Taegun [1 ]
机构
[1] Dongguk Univ, Dept Life Sci, Goyang 10326, South Korea
[2] Seoul Womens Univ, Dept Bio & Environm Technol, Coll Nat Sci, Seoul 01797, South Korea
基金
新加坡国家研究基金会;
关键词
Methylobacterium; new taxon; gamma ray-resistance; phylogenetic analysis; cell morphology; LEAF; DNA; GENUS;
D O I
10.1007/s12275-019-9007-9
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A Gram-stain-negative, asporogenous, aerobic rods, motile by means of a single polar flagellum, catalase- and oxidase-positive, methylotrophic bacterium, designated 17Sr1-28(T), was isolated from gamma ray-irradiated soil. The 16S rRNA gene sequence analysis showed that strain 17Sr1-28(T) was phylogenetically related to Methylobacterium currus PR1016A(T) (96.8%), Methylobacterium platani PMB02(T) (96.2%), Methylobacterium aquaticum DSM 16371(T) (96.3%), Methylobacterium tarhaniae N4211(T) (96.4%), Methylobacterium frigidaeris IER25-16(T) (95.8%), and Methylobacterium organophilum JCM 2833(T) (92.7%). The G+C content calculated based on genome sequence was 71.6%. The average nucleotide identity and in silico DNA-DNA hybridization values between strain 17Sr128(T) and M. currus, M. platani, M. aquaticum, M. tarhaniae, M. frigidaeris, and M. organophilum were 77.7-90.4% and 22-39.6%, respectively. The major fatty acids of strain 17Sr128(T) were summed feature 8 (C-18:1 omega 7c and/or C-18:1 omega 6c), and summed feature 3 (C-16:1 omega 7c and/or C-16:1 omega 6c). The predominant quinone was ubiquinone 10 and the major polar lipids were diphosphatidylglycerol, phosphatidylcholine, phosphatidylethanolamine, and phosphatidylglycerol. On the basis of the data from phenotypic tests and genotypic differences between strain 17Sr1-28(T) and its close phylogenetic relatives, strain 17Sr1-28(T) represents a new species belonging to the genus Methylobacterium, for which the name Methylobacterium terrae sp. nov. (= KCTC 52904(T) = NBRC 112873(T)) is proposed.
引用
收藏
页码:959 / 966
页数:8
相关论文
共 50 条
  • [31] Deinococcus swuensis sp. nov., a gamma-radiation-resistant bacterium isolated from soil
    Jae-Jin Lee
    Hyun Ji Lee
    Gi Seon Jang
    Ja Myoung Yu
    Ji Yoon Cha
    Su Jeong Kim
    Eun Bit Lee
    Myung Kyum Kim
    Journal of Microbiology, 2013, 51 : 305 - 311
  • [32] Deinococcus taeanensis sp. nov., a Radiation-Resistant Bacterium Isolated from a Coastal Dune
    Ji Hee Lee
    Jong-Hyun Jung
    Min-Kyu Kim
    Sangyong Lim
    Current Microbiology, 2022, 79
  • [33] Deinococcus taeanensis sp. nov., a Radiation-Resistant Bacterium Isolated from a Coastal Dune
    Lee, Ji Hee
    Jung, Jong-Hyun
    Kim, Min-Kyu
    Lim, Sangyong
    CURRENT MICROBIOLOGY, 2022, 79 (11)
  • [34] Pontibacter pudoricolor sp. nov., and Pontibacter russatus sp. nov. radiation-resistant bacteria isolated from soil
    Soohyun Maeng
    Yuna Park
    Sang Eun Lee
    Joo Hyun Han
    In-Tae Cha
    Ki-eun Lee
    Byoung-Hee Lee
    Myung Kyum Kim
    Antonie van Leeuwenhoek, 2020, 113 : 1361 - 1369
  • [35] Deinococcus persicinus sp nov., a radiation-resistant bacterium from soil
    Jeon, Sean Hwa
    Kang, Myung-Suk
    Joo, Fun Sun
    Kim, Fun Bit
    Lim, Sangyong
    Jeong, Sun-Wook
    Jung, Hee-Young
    Srinivasan, Sathiyaraj
    Kim, Myung Kyum
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2016, 66 : 5077 - 5082
  • [36] Deinococcus koreensis sp nov., a gamma radiation-resistant bacterium isolated from river water
    Baek, Kiwoon
    Chung, Eu Jin
    Choi, Gang-Guk
    Kim, Min-Kyu
    Lim, Sangyong
    Choi, Ahyoung
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2018, 68 (08) : 2545 - 2550
  • [37] Rhodocytophaga rosea sp. nov. and Nibribacter ruber sp. nov., two radiation-resistant bacteria isolated from soil
    Park, Yuna
    Maeng, Soohyun
    Han, Joo Hyun
    Lee, Sang Eun
    Zhang, Jing
    Kim, Min-Kyu
    Cha, In-Tae
    Lee, Ki-eun
    Lee, Byoung-Hee
    Kim, Myung Kyum
    ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY, 2020, 113 (12): : 2177 - 2185
  • [38] Rhodocytophaga rosea sp. nov. and Nibribacter ruber sp. nov., two radiation-resistant bacteria isolated from soil
    Yuna Park
    Soohyun Maeng
    Joo Hyun Han
    Sang Eun Lee
    Jing Zhang
    Min-Kyu Kim
    In-Tae Cha
    Ki-eun Lee
    Byoung-Hee Lee
    Myung Kyum Kim
    Antonie van Leeuwenhoek, 2020, 113 : 2177 - 2185
  • [39] Hymenobacter terrae sp nov., a Bacterium Isolated from Soil
    Srinivasan, Sathiyaraj
    Lee, Jae-Jin
    Park, Kyoung Ryun
    Park, Se-Hee
    Jung, Hee-Young
    Kim, Myung Kyum
    CURRENT MICROBIOLOGY, 2015, 70 (05) : 643 - 650
  • [40] Microlunatus terrae sp nov., a Bacterium Isolated from Soil
    Lee, Jae-Jin
    Kim, Myung Kyum
    JOURNAL OF MICROBIOLOGY, 2012, 50 (03) : 547 - 552