The effects of artificial selection of the maize genome

被引：577
|
作者：
Wright, SI
Bi, IV
Schroeder, SG
Yamasaki, M
Doebley, JF
McMullen, MD
Gaut, BS [1 ]
机构：
[1] Univ Calif Irvine, Dept Ecol & Evolutionary Biol, Irvine, CA 92697 USA
[2] Univ Calif Irvine, Inst Genom & Bioinformat, Irvine, CA 92697 USA
[3] York Univ, Dept Biol, N York, ON M3J 1P3, Canada
[4] Univ Missouri, Dept Agron, Plant Sci Unit, Columbia, MO 65211 USA
[5] Univ Wisconsin, Dept Genet, Madison, WI 53706 USA
[6] ARS, Plant Genet Res Unit, USDA, Columbia, MO 65211 USA
来源：
SCIENCE | 2005年 / 308卷 / 5726期
关键词：
D O I：
10.1126/science.1107891
中图分类号：
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号：
07 ; 0710 ; 09 ;
摘要：
Domestication promotes rapid phenotypic evolution through artificial selection. We investigated the genetic history by which the wild grass teosinte (Zea mays ssp. parviglumis) was domesticated into modem maize (Z. mays ssp. mays). Analysis of single-nucleotide polymorphisms in 774 genes indicates that 2 to 4% of these genes experienced artificial selection. The remaining genes retain evidence of a population bottleneck associated with domestication. Candidate selected genes with putative function in plant growth are clustered near quantitative trait loci that contribute to phenotypic differences between maize and teosinte. If we assume that our sample of genes is representative, 1200 genes throughout the maize genome have been affected by artificial selection.
引用
收藏
页码：1310 / 1314
页数：5
相关论文
共 50 条
  • [1] The effects of artificial selection on the maize genome (vol 308, pg 1310, 2005)
    Wright, SI
    SCIENCE, 2005, 310 (5745) : 54 - 54
  • [2] Insights into the Effects of Long-Term Artificial Selection on Seed Size in Maize
    Hirsch, Candice N.
    Flint-Garcia, Sherry A.
    Beissinger, Timothy M.
    Eichten, Steven R.
    Deshpande, Shweta
    Barry, Kerrie
    McMullen, Michael D.
    Holland, James B.
    Buckler, Edward S.
    Springer, Nathan
    Buell, C. Robin
    de Leon, Natalia
    Kaeppler, Shawn M.
    GENETICS, 2014, 198 (01) : 409 - +
  • [3] Comparative whole-genome analysis reveals artificial selection effects on Ustilago esculenta genome
    Ye, Zihong
    Pan, Yao
    Zhang, Yafen
    Cui, Haifeng
    Jin, Gulei
    McHardy, Alice C.
    Fan, Longjiang
    Yu, Xiaoping
    DNA RESEARCH, 2017, 24 (06) : 635 - 648
  • [4] A Genome-Wide Scan for Evidence of Selection in a Maize Population Under Long-Term Artificial Selection for Ear Number
    Beissinger, Timothy M.
    Hirsch, Candice N.
    Vaillancourt, Brieanne
    Deshpande, Shweta
    Barry, Kerrie
    Buell, C. Robin
    Kaeppler, Shawn M.
    Gianola, Daniel
    de Leon, Natalia
    GENETICS, 2014, 196 (03) : 829 - +
  • [5] The effect of artificial selection on phenotypic plasticity in maize
    Gage, Joseph L.
    Jarquin, Diego
    Romay, Cinta
    Lorenz, Aaron
    Buckler, Edward S.
    Kaeppler, Shawn
    Alkhalifah, Naser
    Bohn, Martin
    Campbell, Darwin A.
    Edwards, Jode
    Ertl, David
    Flint-Garcia, Sherry
    Gardiner, Jack
    Good, Byron
    Hirsch, Candice N.
    Holland, Jim
    Hooker, David C.
    Knoll, Joseph
    Kolkman, Judith
    Kruger, Greg
    Lauter, Nick
    Lawrence-Dill, Carolyn J.
    Lee, Elizabeth
    Lynch, Jonathan
    Murray, Seth C.
    Nelson, Rebecca
    Petzoldt, Jane
    Rocheford, Torbert
    Schnable, James
    Schnable, Patrick S.
    Scully, Brian
    Smith, Margaret
    Springer, Nathan M.
    Srinivasan, Srikant
    Walton, Renee
    Weldekidan, Teclemariam
    Wisser, Randall J.
    Xu, Wenwei
    Yu, Jianming
    de Leon, Natalia
    NATURE COMMUNICATIONS, 2017, 8
  • [6] The effect of artificial selection on phenotypic plasticity in maize
    Joseph L. Gage
    Diego Jarquin
    Cinta Romay
    Aaron Lorenz
    Edward S. Buckler
    Shawn Kaeppler
    Naser Alkhalifah
    Martin Bohn
    Darwin A. Campbell
    Jode Edwards
    David Ertl
    Sherry Flint-Garcia
    Jack Gardiner
    Byron Good
    Candice N. Hirsch
    Jim Holland
    David C. Hooker
    Joseph Knoll
    Judith Kolkman
    Greg Kruger
    Nick Lauter
    Carolyn J. Lawrence-Dill
    Elizabeth Lee
    Jonathan Lynch
    Seth C. Murray
    Rebecca Nelson
    Jane Petzoldt
    Torbert Rocheford
    James Schnable
    Patrick S. Schnable
    Brian Scully
    Margaret Smith
    Nathan M. Springer
    Srikant Srinivasan
    Renee Walton
    Teclemariam Weldekidan
    Randall J. Wisser
    Wenwei Xu
    Jianming Yu
    Natalia de Leon
    Nature Communications, 8
  • [7] Identifying artificial selection signals in the chicken genome
    Ma, Yunlong
    Gu, Lantao
    Yang, Liubin
    Sun, Chenghao
    Xie, Shengsong
    Fang, Chengchi
    Gong, Yangzhang
    Li, Shijun
    PLOS ONE, 2018, 13 (04):
  • [8] Tracking footprints of artificial selection in the dog genome
    Akey, Joshua M.
    Ruhe, Alison L.
    Akey, Dayna T.
    Wong, Aaron K.
    Connelly, Caitlin F.
    Madeoy, Jennifer
    Nicholas, Thomas J.
    Neff, Mark W.
    PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2010, 107 (03) : 1160 - 1165
  • [9] Artificial selection of maize as a bridging case to teach natural selection: a simulation proposal
    Gomez Galindo, Alma Adrianna
    Gonzalez Galli, Leonardo
    Garcia Franco, Alejandra
    JOURNAL OF BIOLOGICAL EDUCATION, 2021, 55 (05) : 487 - 500
  • [10] Comparison of genome-wide and phenotypic selection indices in maize
    Gustavo Vitti Môro
    Mateus Figueiredo Santos
    Cláudio Lopes de Souza Júnior
    Euphytica, 2019, 215
12345