Complete Genome Sequence of Bacteriophage Fizzles, Isolated from Microbacterium foliorum

被引:1
作者
Adams, Skyler [1 ]
Spotz, Gabrielle [1 ]
Babcock, Riley [1 ]
Butler, Chloe [1 ]
Conger, Samantha [1 ]
Crew, Madison [1 ]
Garcia, Stephanie [1 ]
Gonzalez, Joanna [1 ]
Hodges, Jocelyn [1 ]
Martinez, Alondra [1 ]
Munoz, Samuel [1 ]
O'Grady, Chloe [1 ]
Quirl, Abigail [1 ]
Sefcik, Kristin [1 ]
Taylor, Tanner [1 ]
Vazquez, Gustavo [1 ]
Cox, Faith [1 ]
Edwards, Dustin [1 ]
机构
[1] Tarleton State Univ, Dept Biol Sci, Stephenville, TX 76401 USA
来源
MICROBIOLOGY RESOURCE ANNOUNCEMENTS | 2022年 / 11卷 / 01期
关键词
SEARCH;
D O I
10.1128/MRA.01077-21
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Microbacteriophage Fizzles has a 62,078-bp linear double-stranded DNA genome sequence, predicted to contain 104 protein-coding genes. Fizzles is a Siphoviridae actinobacteriophage isolated from an ant hill soil sample collected in Stephenville, TX. Microbacteriophage Fizzles has >83.6% nucleotide identity with microbacteriophages Squash and Nike.
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页数:3
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共 15 条
  • [1] BASIC LOCAL ALIGNMENT SEARCH TOOL
    ALTSCHUL, SF
    GISH, W
    MILLER, W
    MYERS, EW
    LIPMAN, DJ
    [J]. JOURNAL OF MOLECULAR BIOLOGY, 1990, 215 (03) : 403 - 410
  • [2] GeneMark: web software for gene finding in prokaryotes, eukaryotes and viruses
    Besemer, J
    Borodovsky, M
    [J]. NUCLEIC ACIDS RESEARCH, 2005, 33 : W451 - W454
  • [3] Borodovsky Mark, 2003, Curr Protoc Bioinformatics, VChapter 4, DOI 10.1002/0471250953.bi0405s01
  • [4] Improved microbial gene identification with GLIMMER
    Delcher, AL
    Harmon, D
    Kasif, S
    White, O
    Salzberg, SL
    [J]. NUCLEIC ACIDS RESEARCH, 1999, 27 (23) : 4636 - 4641
  • [5] Consed: a graphical editor for next-generation sequencing
    Gordon, David
    Green, Phil
    [J]. BIOINFORMATICS, 2013, 29 (22) : 2936 - 2937
  • [6] A Broadly Implementable Research Course in Phage Discovery and Genomics for First-Year Undergraduate Students
    Jordan, Tuajuanda C.
    Burnett, Sandra H.
    Carson, Susan
    Caruso, Steven M.
    Clase, Kari
    DeJong, Randall J.
    Dennehy, John J.
    Denver, Dee R.
    Dunbar, David
    Elgin, Sarah C. R.
    Findley, Ann M.
    Gissendanner, Chris R.
    Golebiewska, Urszula P.
    Guild, Nancy
    Hartzog, Grant A.
    Grillo, Wendy H.
    Hollowell, Gail P.
    Hughes, Lee E.
    Johnson, Allison
    King, Rodney A.
    Lewis, Lynn O.
    Li, Wei
    Rosenzweig, Frank
    Rubin, Michael R.
    Saha, Margaret S.
    Sandoz, James
    Shaffer, Christopher D.
    Taylor, Barbara
    Temple, Louise
    Vazquez, Edwin
    Ware, Vassie C.
    Barker, Lucia P.
    Bradley, Kevin W.
    Jacobs-Sera, Deborah
    Pope, Welkin H.
    Russell, Daniel A.
    Cresawn, Steven G.
    Lopatto, David
    Bailey, Cheryl P.
    Hatfull, Graham F.
    [J]. MBIO, 2014, 5 (01):
  • [7] ARAGORN, a program to detect tRNA genes and tmRNA genes in nucleotide sequences
    Laslett, D
    Canback, B
    [J]. NUCLEIC ACIDS RESEARCH, 2004, 32 (01) : 11 - 16
  • [8] tRNAscan-SE On-line: integrating search and context for analysis of transfer RNA genes
    Lowe, Todd M.
    Chan, Patricia P.
    [J]. NUCLEIC ACIDS RESEARCH, 2016, 44 (W1) : W54 - W57
  • [9] Poxleitner M., 2018, Phage Discovery Guide
  • [10] Russell DA, 2018, METHODS MOL BIOL, V1681, P109, DOI 10.1007/978-1-4939-7343-9_9