Complete Genome Sequence of Bacteriophage Fizzles, Isolated from Microbacterium foliorum

被引:1
作者
Adams, Skyler [1 ]
Spotz, Gabrielle [1 ]
Babcock, Riley [1 ]
Butler, Chloe [1 ]
Conger, Samantha [1 ]
Crew, Madison [1 ]
Garcia, Stephanie [1 ]
Gonzalez, Joanna [1 ]
Hodges, Jocelyn [1 ]
Martinez, Alondra [1 ]
Munoz, Samuel [1 ]
O'Grady, Chloe [1 ]
Quirl, Abigail [1 ]
Sefcik, Kristin [1 ]
Taylor, Tanner [1 ]
Vazquez, Gustavo [1 ]
Cox, Faith [1 ]
Edwards, Dustin [1 ]
机构
[1] Tarleton State Univ, Dept Biol Sci, Stephenville, TX 76401 USA
关键词
SEARCH;
D O I
10.1128/MRA.01077-21
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Microbacteriophage Fizzles has a 62,078-bp linear double-stranded DNA genome sequence, predicted to contain 104 protein-coding genes. Fizzles is a Siphoviridae actinobacteriophage isolated from an ant hill soil sample collected in Stephenville, TX. Microbacteriophage Fizzles has >83.6% nucleotide identity with microbacteriophages Squash and Nike.
引用
收藏
页数:3
相关论文
共 15 条
[1]  
ALTSCHUL SF, 1990, J MOL BIOL, V215, P403, DOI 10.1006/jmbi.1990.9999
[2]   GeneMark: web software for gene finding in prokaryotes, eukaryotes and viruses [J].
Besemer, J ;
Borodovsky, M .
NUCLEIC ACIDS RESEARCH, 2005, 33 :W451-W454
[3]  
Borodovsky Mark, 2003, Curr Protoc Bioinformatics, VChapter 4, DOI 10.1002/0471250953.bi0405s01
[4]   Improved microbial gene identification with GLIMMER [J].
Delcher, AL ;
Harmon, D ;
Kasif, S ;
White, O ;
Salzberg, SL .
NUCLEIC ACIDS RESEARCH, 1999, 27 (23) :4636-4641
[5]   Consed: a graphical editor for next-generation sequencing [J].
Gordon, David ;
Green, Phil .
BIOINFORMATICS, 2013, 29 (22) :2936-2937
[6]   A Broadly Implementable Research Course in Phage Discovery and Genomics for First-Year Undergraduate Students [J].
Jordan, Tuajuanda C. ;
Burnett, Sandra H. ;
Carson, Susan ;
Caruso, Steven M. ;
Clase, Kari ;
DeJong, Randall J. ;
Dennehy, John J. ;
Denver, Dee R. ;
Dunbar, David ;
Elgin, Sarah C. R. ;
Findley, Ann M. ;
Gissendanner, Chris R. ;
Golebiewska, Urszula P. ;
Guild, Nancy ;
Hartzog, Grant A. ;
Grillo, Wendy H. ;
Hollowell, Gail P. ;
Hughes, Lee E. ;
Johnson, Allison ;
King, Rodney A. ;
Lewis, Lynn O. ;
Li, Wei ;
Rosenzweig, Frank ;
Rubin, Michael R. ;
Saha, Margaret S. ;
Sandoz, James ;
Shaffer, Christopher D. ;
Taylor, Barbara ;
Temple, Louise ;
Vazquez, Edwin ;
Ware, Vassie C. ;
Barker, Lucia P. ;
Bradley, Kevin W. ;
Jacobs-Sera, Deborah ;
Pope, Welkin H. ;
Russell, Daniel A. ;
Cresawn, Steven G. ;
Lopatto, David ;
Bailey, Cheryl P. ;
Hatfull, Graham F. .
MBIO, 2014, 5 (01)
[7]   ARAGORN, a program to detect tRNA genes and tmRNA genes in nucleotide sequences [J].
Laslett, D ;
Canback, B .
NUCLEIC ACIDS RESEARCH, 2004, 32 (01) :11-16
[8]   tRNAscan-SE On-line: integrating search and context for analysis of transfer RNA genes [J].
Lowe, Todd M. ;
Chan, Patricia P. .
NUCLEIC ACIDS RESEARCH, 2016, 44 (W1) :W54-W57
[9]  
Poxleitner M., 2018, Phage Discovery Guide
[10]  
Russell DA, 2018, METHODS MOL BIOL, V1681, P109, DOI 10.1007/978-1-4939-7343-9_9