Estimating Survival in Patients with Operable Skeletal Metastases: An Application of a Bayesian Belief Network

被引:141
作者
Forsberg, Jonathan Agner [1 ,2 ]
Eberhardt, John [3 ]
Boland, Patrick J. [1 ]
Wedin, Rikard [2 ]
Healey, John H. [1 ]
机构
[1] Mem Sloan Kettering Canc Ctr, Dept Surg, Orthopaed Serv, New York, NY 10021 USA
[2] Karolinska Univ Hosp, Karolinska Inst, Dept Mol Med & Surg, Sect Orthopaed & Sports Med, Stockholm, Sweden
[3] DecisionQ Corp, Bioinformat Div, Washington, DC USA
来源
PLOS ONE | 2011年 / 6卷 / 05期
关键词
ARTIFICIAL NEURAL-NETWORKS; BREAST-CANCER; LUNG-CANCER; MODEL; PREDICTION; PROGNOSIS; ONCOLOGY; SURGERY; DISEASE;
D O I
10.1371/journal.pone.0019956
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Background: Accurate estimations of life expectancy are important in the management of patients with metastatic cancer affecting the extremities, and help set patient, family, and physician expectations. Clinically, the decision whether to operate on patients with skeletal metastases, as well as the choice of surgical procedure, are predicated on an individual patient's estimated survival. Currently, there are no reliable methods for estimating survival in this patient population. Bayesian classification, which includes Bayesian belief network (BBN) modeling, is a statistical method that explores conditional, probabilistic relationships between variables to estimate the likelihood of an outcome using observed data. Thus, BBN models are being used with increasing frequency in a variety of diagnoses to codify complex clinical data into prognostic models. The purpose of this study was to determine the feasibility of developing Bayesian classifiers to estimate survival in patients undergoing surgery for metastases of the axial and appendicular skeleton. Methods: We searched an institution-owned patient management database for all patients who underwent surgery for skeletal metastases between 1999 and 2003. We then developed and trained a machine-learned BBN model to estimate survival in months using candidate features based on historical data. Ten-fold cross-validation and receiver operating characteristic (ROC) curve analysis were performed to evaluate the BNN model's accuracy and robustness. Results: A total of 189 consecutive patients were included. First-degree predictors of survival differed between the 3-month and 12-month models. Following cross validation, the area under the ROC curve was 0.85 (95% CI: 0.80-0.93) for 3-month probability of survival and 0.83 (95% CI: 0.77-0.90) for 12-month probability of survival. Conclusions: A robust, accurate, probabilistic naive BBN model was successfully developed using observed clinical data to estimate individualized survival in patients with operable skeletal metastases. This method warrants further development and must be externally validated in other patient populations.
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页数:7
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