The complete plastid genome sequence of Aconitum brachypodum (Ranunculaceae): an Endangered species endemic to China

被引：2

作者：

Meng, Jing ^{[1
]}

Zhang, Linna ^{[1
]}

Li, Xuepei ^{[1
]}

He, Jun ^{[2
]}

机构：

[1] Yunnan Agr Univ, Coll Hort & Landscape, Kunming, Yunnan, Peoples R China

[2] Chinese Acad Sci, Kunming Inst Bot, Kunming 650204, Yunnan, Peoples R China

来源：

MITOCHONDRIAL DNA PART B-RESOURCES | 2019年 / 4卷 / 01期

基金：

中国国家自然科学基金;

关键词：

Aconitum brachypodum; plastid genome; endangered species; phylogenetic analysis;

D O I：

10.1080/23802359.2018.1540264

中图分类号：

Q3 [遗传学];

学科分类号：

071007 ; 090102 ;

摘要：

Aconitum brachypodum is an endangered plant endemic to south-west China. The plastid genome of this was characterized by Illumina next-generation sequencing technology. The complete plastid genome is 155,651 bp long with a pair of 26,213 bp inverted repeat regions (IRs) that are separated by a large single copy (LSC) region of 86,292 bp and a small single copy (SSC) region of 16,933 bp. A total of 132 genes were annotated, including 85 protein-coding genes, 37 tRNA genes, eight rRNA genes and two pseudogenes. In addition, five palindromic, five forward, nine tandem repeats and 266 SSRs were detected in A. brachypodum. Furthermore, phylogenetic analysis illustrated that A. brachypodum is closely related to other ten Aconitum subgenus. Aconitum species are with high bootstrap support of 100%.

引用

页码：130 / 131

页数：2

共 50 条

[11] The complete plastid genome sequence of Lysidice brevicalyx (Fabaceae: Detarioideae), an arbor species endemic to China
Li, Jian-Xin
Meng, Ying
Nie, Ze-Long
Tu, Tie-Yao
MITOCHONDRIAL DNA PART B-RESOURCES, 2023, 8 (09): : 1003 - 1006
[12] Complete chloroplast genome sequence of Clematis calcicola (Ranunculaceae), a species endemic to Korea
Park, Beom Kyun
Jang, Young-Jong
Son, Dong Chan
Gil, Hee-Young
Kim, Sang-Chul
KOREAN JOURNAL OF PLANT TAXONOMY, 2022, 52 (04): : 262 - 268
[13] The complete chloroplast genome sequence of Abies chensiensis (Pinaceae: Abietoideae), an endangered species endemic to China
Li, Weimin
Chen, Chen
Bai, Guoqing
Li, Bin
Chen, Hao
Zhou, Yafu
Li, Sifeng
MITOCHONDRIAL DNA PART B-RESOURCES, 2018, 3 (02): : 986 - 987
[14] Characterization of the complete chloroplast genome of Aconitum pendulum (Ranunculaceae), an endemic medicinal herb
Wang, Ze-Huan
Li, Ya-Qiong
MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (01): : 382 - 383
[15] The complete chloroplast genome sequence of Chimonobambusa luzhiensis, an endangered species endemic to Guizhou Province, China
Wu, Mingli
Liu, Yanjiang
Xu, Xue
Zhu, Xiao
Gou, Guangqian
Dai, Zhaoxia
MITOCHONDRIAL DNA PART B-RESOURCES, 2022, 7 (07): : 1360 - 1361
[16] Complete chloroplast genome sequence of Semiliquidambar cathayensis (hamamelidaceae), a rare and endangered species endemic to China
Shi, Yancai
Duan, Na
Liu, Bingbing
MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (02): : 3252 - 3253
[17] The complete plastid genome sequence of Rheum wittrockii (Polygonaceae), endangered species of Kazakhstan
Dagarova, Shynar S.
Sitpayeva, Gulnara T.
Pak, Jae-Hong
Kim, Jung Sung
MITOCHONDRIAL DNA PART B-RESOURCES, 2017, 2 (02): : 516 - 517
[18] The complete chloroplast genome sequence of Ranunculus pekinensis (L. Liou) Luferov (Ranunculaceae), a species endemic to China
Liu, Xuehua
Yang, Wenli
Zhang, Danke
Liu, Hao
Cui, Yueming
Wang, Lei
Hu, Hongyu
Yin, Yue
Zhang, Gangmin
MITOCHONDRIAL DNA PART B-RESOURCES, 2022, 7 (05): : 841 - 843
[19] Complete chloroplast genome sequence of Eranthis byunsanensis BY Sun (Ranunculaceae), an endemic species in Korea
Park, Joon Moh
Oh, Ami
Koo, Jachoon
MITOCHONDRIAL DNA PART B-RESOURCES, 2023, 8 (05): : 570 - 574
[20] The complete chloroplast genome of Calycanthus chinensis, an endangered species endemic to China
Xiaodan Chen
Jia Yang
Hao Zhang
Ru Bai
Xiao Zhang
Guoqing Bai
Panfeng Dai
Guifang Zhao
Conservation Genetics Resources, 2019, 11 : 55 - 58

← 1 2 3 4 5 →