An update on inhibitors targeting RNA-dependent RNA polymerase for COVID-19 treatment: Promises and challenges

被引:21
作者
Xu, Xiaoying [1 ]
Chen, Yuheng [3 ]
Lu, Xinyu [2 ]
Zhang, Wanlin [2 ]
Fang, Wenxiu [2 ]
Yuan, Luping [2 ]
Wang, Xiaoyan [2 ]
机构
[1] Zhejiang Chinese Med Univ, Sch Basic Med Sci, Hangzhou 310053, Peoples R China
[2] Zhejiang Chinese Med Univ, Sch Pharmaceut Sci, Hangzhou 311402, Peoples R China
[3] Zhejiang Chinese Med Univ, Clin Med Coll 2, Hangzhou 310053, Peoples R China
基金
中国国家自然科学基金;
关键词
COVID-19; SARS-CoV-2; Antiviral; RdRp; Inhibitors; BAICALEIN CHEWABLE TABLETS; SCUTELLARIA-BAICALENSIS; SARS-COV-2; REPLICATION; REMDESIVIR GS-5734; MOLECULAR-BASIS; ZIKA VIRUS; OPEN-LABEL; IN-VIVO; CORONAVIRUS; NUCLEOSIDE;
D O I
10.1016/j.bcp.2022.115279
中图分类号
R9 [药学];
学科分类号
1007 ;
摘要
The highly transmissible variants of SARS-CoV-2, the causative pathogen of the COVID-19 pandemic, bring new waves of infection worldwide. Identification of effective therapeutic drugs to combat the COVID-19 pandemic is an urgent global need. RNA-dependent RNA polymerase (RdRp), an essential enzyme for viral RNA replication, is the most promising target for antiviral drug research since it has no counterpart in human cells and shows the highest conservation across coronaviruses. This review summarizes recent progress in studies of RdRp inhibitors, focusing on interactions between these inhibitors and the enzyme complex, based on structural analysis, and their effectiveness. In addition, we propose new possible strategies to address the shortcomings of current in-hibitors, which may guide the development of novel efficient inhibitors to combat COVID-19.
引用
收藏
页数:16
相关论文
共 150 条
[1]   Analysis of SARS-CoV-2 RNA-dependent RNA polymerase as a potential therapeutic drug target using a computational approach [J].
Aftab, Syed Ovais ;
Ghouri, Muhammad Zubair ;
Masood, Muhammad Umer ;
Haider, Zeshan ;
Khan, Zulqurnain ;
Ahmad, Aftab ;
Munawar, Nayla .
JOURNAL OF TRANSLATIONAL MEDICINE, 2020, 18 (01)
[2]   Small-Molecule Antiviral β-D-N4-Hydroxycytidine Inhibits a Proofreading-Intact Coronavirus with a High Genetic Barrier to Resistance [J].
Agostini, Maria L. ;
Pruijssers, Andrea J. ;
Chappell, James D. ;
Gribble, Jennifer ;
Lu, Xiaotao ;
Andres, Erica L. ;
Bluemling, Gregory R. ;
Lockwood, Mark A. ;
Sheahan, Timothy P. ;
Sims, Amy C. ;
Natchus, Michael G. ;
Saindane, Manohar ;
Kolykhalov, Alexander A. ;
Painter, George R. ;
Baric, Ralph S. ;
Denison, Mark R. .
JOURNAL OF VIROLOGY, 2019, 93 (24)
[3]   Coronavirus Susceptibility to the Antiviral Remdesivir (GS-5734) Is Mediated by the Viral Polymerase and the Proofreading Exoribonuclease [J].
Agostini, Maria L. ;
Andres, Erica L. ;
Sims, Amy C. ;
Graham, Rachel L. ;
Sheahan, Timothy P. ;
Lu, Xiaotao ;
Smith, Everett Clinton ;
Case, James Brett ;
Feng, Joy Y. ;
Jordan, Robert ;
Ray, Adrian S. ;
Cihlar, Tomas ;
Siegel, Dustin ;
Mackman, Richard L. ;
Clarke, Michael O. ;
Baric, Ralph S. ;
Denison, Mark R. .
MBIO, 2018, 9 (02)
[4]   Prediction of Small Molecule Inhibitors Targeting the Severe Acute Respiratory Syndrome Coronavirus-2 RNA-dependent RNA Polymerase [J].
Ahmad, Mohammed ;
Dwivedy, Abhisek ;
Mariadasse, Richard ;
Tiwari, Satish ;
Kar, Deepsikha ;
Jeyakanthan, Jeyaraman ;
Biswal, Bichitra K. .
ACS OMEGA, 2020, 5 (29) :18356-18366
[5]   Suramin Inhibits Chikungunya Virus Replication by Interacting with Virions and Blocking the Early Steps of Infection [J].
Albulescu, Irina C. ;
White-Scholten, Leonie ;
Tas, Ali ;
Hoornweg, Tabitha E. ;
Ferla, Salvatore ;
Kovacikova, Kristina ;
Smit, Jolanda M. ;
Brancale, Andrea ;
Snijder, Eric J. ;
van Hemert, Martijn J. .
VIRUSES-BASEL, 2020, 12 (03)
[6]   Suramin inhibits Zika virus replication by interfering with virus attachment and release of infectious particles [J].
Albulescu, Irina C. ;
Kovacikova, Kristina ;
Tas, Ali ;
Snijder, Eric J. ;
van Hemert, Martijn J. .
ANTIVIRAL RESEARCH, 2017, 143 :230-236
[7]  
Andrews N, 2022, NEW ENGL J MED, V386, P1532, DOI [10.1056/NEJMoa2119451, 10.1016/S1473-3099(22)00309-7]
[8]   Omicron variant of SARS-CoV-2: Genomics, transmissibility, and responses to current COVID-19 vaccines [J].
Araf, Yusha ;
Akter, Fariya ;
Tang, Yan-dong ;
Fatemi, Rabeya ;
Parvez, Md Sorwer Alam ;
Zheng, Chunfu ;
Hossain, Md Golzar .
JOURNAL OF MEDICAL VIROLOGY, 2022, 94 (05) :1825-1832
[9]   Structural insights into SARS-CoV-2 proteins [J].
Arya, Rimanshee ;
Kumari, Shweta ;
Pandey, Bharati ;
Mistry, Hiral ;
Bihani, Subhash C. ;
Das, Amit ;
Prashar, Vishal ;
Gupta, Gagan D. ;
Panicker, Lata ;
Kumar, Mukesh .
JOURNAL OF MOLECULAR BIOLOGY, 2021, 433 (02)
[10]  
Beigel JH, 2020, NEW ENGL J MED, V383, P1813, DOI [10.1056/NEJMoa2007764, 10.1056/NEJMc2022236]