Expression characteristic, immune signature, and prognosis value of EFNA family identified by multi-omics integrative analysis in pan-cancer

被引:5
|
作者
Jiao, Zonglin [1 ]
Feng, Xiao [1 ,2 ]
Cui, Yuqing [1 ]
Wang, Lei [1 ]
Gan, Junqing [1 ]
Zhao, Yanbin [1 ]
Meng, Qingwei [1 ]
机构
[1] Harbin Med Univ, Dept Med Oncol, Canc Hosp, Harbin, Peoples R China
[2] Shandong First Med Univ, Dept Oncol, Cent Hosp, Jinan, Peoples R China
基金
中国国家自然科学基金;
关键词
EFNA family; Pan-cancer; Tumor immune microenvironment; Tumor genesis; Multi-omics bioinformatics; EPH RECEPTORS; CELLS; BREAST; GLIOMA; ANGIOGENESIS; BIOMARKERS; PROMOTES; INVASION; STEMNESS; EPHRINS;
D O I
10.1186/s12885-022-09951-0
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
Background EphrinA (EFNA) are Eph receptor ligands that regulate various disease processes. Nonetheless, the expression characteristics of EFNAs in pan-cancer, their relationship with tumor immune microenvironment, and prognostic value landscape remain unknown. Methods A comprehensive landscape of EFNAs was created using various statistical data extracted from 33 cancers. Subsequently, we identified differential expression, genetic variations, potential function enrichment, tumor immune-related analysis, and drug sensitivity. Further, we investigated the clinical features and diagnostic prognostic value of EFNAs. RT-qPCR, western blot and immunohistochemistry (IHC) were used to validate the expression level and significant clinical value of EFNA5 in lung adenocarcinoma cell lines and tissues. Results EFNAs were highly mutated in various cancers. Genomic and epigenetic alterations of EFNAs were observed in various tumors, where an oncogenic mutation in specific cancer types potentially affected EFNA expression. Moreover, tumor-derived EFNAs were significantly related to the tumor immune microenvironment, suggesting that they are promising therapeutic targets. The majority of EFNA family genes were significantly linked to patient prognosis. Eventually, EFNA5 was an independent prognostic factor in lung adenocarcinoma. Conclusion In summary, EFNAs are crucial in tumor immune regulation, and EFNA5 is a prognostic marker in lung adenocarcinoma. Our findings provide new insights into EFNAs from a bioinformatics standpoint and highlight the significance of EFNAs in cancer diagnosis and treatment.
引用
收藏
页数:18
相关论文
共 50 条
  • [21] Multi-Omics Analysis of the Expression and Prognosis for FKBP Gene Family in Renal Cancer
    Sun, Zeqiang
    Qin, Xin
    Fang, Juanjuan
    Tang, Yueqing
    Fan, Yidong
    FRONTIERS IN ONCOLOGY, 2021, 11
  • [22] Comprehensive pan-cancer analysis of FUTs family as prognostic and immunity markers based on multi-omics data
    Jia, Zexi
    Liao, Pan
    Yan, Bo
    Lei, Ping
    DISCOVER ONCOLOGY, 2024, 15 (01)
  • [23] Multi-omics analysis of TLCD1 as a promising biomarker in pan-cancer
    Wang, Shengli
    Zhang, Mingyue
    Sun, Hongyan
    Li, Tao
    Hao, Jianlei
    Fang, Meixia
    Dong, Jie
    Xu, Hongbiao
    FRONTIERS IN CELL AND DEVELOPMENTAL BIOLOGY, 2024, 11
  • [24] CAMOIP: a web server for comprehensive analysis on multi-omics of immunotherapy in pan-cancer
    Lin, Anqi
    Qi, Chang
    Wei, Ting
    Li, Mengyao
    Cheng, Quan
    Liu, Zaoqu
    Luo, Peng
    Zhang, Jian
    BRIEFINGS IN BIOINFORMATICS, 2022, 23 (03)
  • [25] Multi-omics evaluation of the prognostic value and immune signature of FCN1 in pan-cancer and its relationship with proliferation and apoptosis in acute myeloid leukemia
    Zhong, Fangfang
    Song, Lijun
    Li, Hao
    Liu, Jing
    Liu, Chunyan
    Guo, Qulian
    Liu, Wenjun
    FRONTIERS IN GENETICS, 2024, 15
  • [26] Multi-Omics Analysis of Molecular Characteristics and Carcinogenic Effect of NFE2L3 in Pan-Cancer
    Liu, Mengxiao
    Wei, Hui
    Yang, Jing
    Chen, Xia
    Wang, Haoying
    Zheng, Ya
    Wang, Yuping
    Zhou, Yongning
    FRONTIERS IN GENETICS, 2022, 13
  • [27] Multi-omics analysis reveals a molecular landscape of the early recurrence and early metastasis in pan-cancer
    He, Dan-ni
    Wang, Na
    Wen, Xiao-Ling
    Li, Xu-Hua
    Guo, Yu
    Fu, Shu-heng
    Xiong, Fei-fan
    Wu, Zhe-yu
    Zhu, Xu
    Gao, Xiao-ling
    Wang, Zhen-zhen
    Wang, Hong-jiu
    FRONTIERS IN GENETICS, 2023, 14
  • [28] A Multi-Omics Pan-Cancer Analysis of 4EBP1 in Cancer Prognosis and Cancer-Associated Fibroblasts Infiltration
    Du, Kunpeng
    Zou, Jingwen
    Liu, Chunshan
    Khan, Muhammad
    Xie, Tao
    Huang, Xiaoting
    Zhang, Ke
    Yuan, Yawei
    Wang, Baiyao
    FRONTIERS IN GENETICS, 2022, 13
  • [29] Multi-omics pan-cancer study of SPTBN2 and its value as a potential therapeutic target in pancreatic cancer
    Chang, Hongliang
    Chen, Hong
    Ma, Taiheng
    Ma, Kexin
    Li, Yi
    Suo, Lida
    Liang, Xiangnan
    Jia, Kunyu
    Ma, Jiahong
    Li, Jing
    Sun, Deguang
    SCIENTIFIC REPORTS, 2024, 14 (01):
  • [30] Multi-omics integration analysis of GPCRs in pan-cancer to uncover inter-omics relationships and potential driver genes
    Li, Shiqi
    Chen, Xin
    Chen, Jianfang
    Wu, Binjian
    Liu, Jing
    Guo, Yanzhi
    Li, Menglong
    Pu, Xuemei
    COMPUTERS IN BIOLOGY AND MEDICINE, 2023, 161