Machine Learning Approaches to Retrieve High-Quality, Clinically Relevant Evidence From the Biomedical Literature: Systematic Review

被引:14
作者
Abdelkader, Wael [1 ]
Navarro, Tamara [1 ]
Parrish, Rick [1 ]
Cotoi, Chris [1 ]
Germini, Federico [1 ,2 ]
Iorio, Alfonso [1 ,2 ]
Haynes, R. Brian [1 ,2 ]
Lokker, Cynthia [1 ]
机构
[1] McMaster Univ, Dept Hlth Res Methods Evidence & Impact, Hlth Informat Res Unit, 1280 Main St W,CRL Bldg,First Floor, Hamilton, ON L8S 4K1, Canada
[2] McMaster Univ, Dept Med, Hamilton, ON, Canada
关键词
machine learning; bioinformatics; information retrieval; evidence-based medicine; literature databases; systematic review; accuracy; medical literature; clinical support; clinical care; METHODOLOGICAL SEARCH FILTERS; HEALTH-CARE; EXTRACTION; MEDICINE; MEDLINE; TRIALS;
D O I
10.2196/30401
中图分类号
R-058 [];
学科分类号
摘要
Background: The rapid growth of the biomedical literature makes identifying strong evidence a time-consuming task. Applying machine learning to the process could be a viable solution that limits effort while maintaining accuracy. Objective: The goal of the research was to summarize the nature and comparative performance of machine learning approaches that have been applied to retrieve high-quality evidence for clinical consideration from the biomedical literature. Methods: We conducted a systematic review of studies that applied machine learning techniques to identify high-quality clinical articles in the biomedical literature. Multiple databases were searched to July 2020. Extracted data focused on the applied machine learning model, steps in the development of the models, and model performance. Results: From 3918 retrieved studies, 10 met our inclusion criteria. All followed a supervised machine learning approach and applied, from a limited range of options, a high-quality standard for the training of their model. The results show that machine learning can achieve a sensitivity of 95% while maintaining a high precision of 86%. Conclusions: Machine learning approaches perform well in retrieving high-quality clinical studies. Performance may improve by applying more sophisticated approaches such as active learning and unsupervised machine learning approaches.
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页数:14
相关论文
共 75 条
  • [1] Deep Learning Based Biomedical Literature Classification Using Criteria of Scientific Rigor
    Afzal, Muhammad
    Park, Beom Joo
    Hussain, Maqbool
    Lee, Sungyoung
    [J]. ELECTRONICS, 2020, 9 (08) : 1 - 12
  • [2] Context-aware grading of quality evidences for evidence-based decision-making
    Afzal, Muhammad
    Hussain, Maqbool
    Haynes, Robert Brian
    Lee, Sungyoung
    [J]. HEALTH INFORMATICS JOURNAL, 2019, 25 (02) : 429 - 445
  • [3] Text Classification Using Machine Learning Methods-A Survey
    Agarwal, Basant
    Mittal, Namita
    [J]. PROCEEDINGS OF THE SECOND INTERNATIONAL CONFERENCE ON SOFT COMPUTING FOR PROBLEM SOLVING (SOCPROS 2012), 2014, 236 : 701 - 709
  • [4] [Anonymous], PubMed Clinical Queries
  • [5] [Anonymous], 2016, Search filters for MEDLINE in Ovid syntax and the PubMed translation
  • [6] [Anonymous], 2019, INCLUSION CRITERIA
  • [7] [Anonymous], 2015, USERS GUIDE MED LIT
  • [8] [Anonymous], 2011, BMJ-BRIT MED J, DOI [DOI 10.1136/bmj.d5928, 10.1136/bmj.d5928]
  • [9] Text categorization models for high-quality article retrieval in internal medicine
    Aphinyanaphongs, Y
    Tsamardinos, I
    Statnikov, A
    Hardin, D
    Aliferis, CF
    [J]. JOURNAL OF THE AMERICAN MEDICAL INFORMATICS ASSOCIATION, 2005, 12 (02) : 207 - 216
  • [10] Aphinyanaphongs Y, AMIA ANN S P, P31