Involvement of budding yeast Rad5 in translesion DNA synthesis through physical interaction with Rev1

被引:51
作者
Xu, Xin [1 ]
Lin, Aiyang [1 ]
Zhou, Cuiyan [2 ]
Blackwell, Susan R. [3 ]
Zhang, Yiran [1 ]
Wang, Zihao [1 ]
Feng, Qianqian [1 ]
Guan, Ruifang [2 ]
Hanna, Michelle D. [3 ]
Chen, Zhucheng [2 ]
Xiao, Wei [1 ,3 ]
机构
[1] Capital Normal Univ, Coll Life Sci, Beijing 100048, Peoples R China
[2] Tsinghua Univ, Sch Life Sci, Struct Biol Ctr, Beijing 100084, Peoples R China
[3] Univ Saskatchewan, Dept Microbiol & Immunol, Saskatoon, SK S7N 5E5, Canada
基金
加拿大自然科学与工程研究理事会;
关键词
SIMPLE REPETITIVE SEQUENCES; POSTREPLICATION REPAIR; SACCHAROMYCES-CEREVISIAE; HELICASE ACTIVITY; POLYMERASE-ZETA; ERROR-PRONE; UBIQUITIN; PROTEIN; GENE; MUTAGENESIS;
D O I
10.1093/nar/gkw183
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
DNA damage tolerance (DDT) is responsible for genomic stability and cell viability by bypassing the replication block. In Saccharomyces cerevisiae DDT employs two parallel branch pathways to bypass the DNA lesion, namely translesion DNA synthesis (TLS) and error-free lesion bypass, which are mediated by sequential modifications of PCNA. Rad5 has been placed in the error-free branch of DDT because it contains an E3 ligase domain required for PCNA polyubiquitination. Rad5 is a multi-functional protein and may also play a role in TLS, since it interacts with the TLS polymerase Rev1. In this study we mapped the Rev1-interaction domain in Rad5 to the amino acid resolution and demonstrated that Rad5 is indeed involved in TLS possibly through recruitment of Rev1. Genetic analyses show that the dual functions of Rad5 can be separated and reconstituted. Crystal structure analysis of the Rad5-Rev1 interaction reveals a consensus RFF motif in the Rad5 N-terminus that binds to a hydrophobic pocket within the C-terminal domain of Rev1 that is highly conserved in eukaryotes. This study indicates that Rad5 plays a critical role in pathway choice between TLS and error-free DDT.
引用
收藏
页码:5231 / 5245
页数:15
相关论文
共 51 条
[1]   PHENIX: a comprehensive Python']Python-based system for macromolecular structure solution [J].
Adams, Paul D. ;
Afonine, Pavel V. ;
Bunkoczi, Gabor ;
Chen, Vincent B. ;
Davis, Ian W. ;
Echols, Nathaniel ;
Headd, Jeffrey J. ;
Hung, Li-Wei ;
Kapral, Gary J. ;
Grosse-Kunstleve, Ralf W. ;
McCoy, Airlie J. ;
Moriarty, Nigel W. ;
Oeffner, Robert ;
Read, Randy J. ;
Richardson, David C. ;
Richardson, Jane S. ;
Terwilliger, Thomas C. ;
Zwart, Peter H. .
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 2010, 66 :213-221
[2]   The RADS gene product involved in the avoidance of non-homologous end-joining of DNA double strand breaks in the yeast Saccharomyces cerevisiae [J].
Ahne, F ;
Jha, B ;
EckardtSchupp, F .
NUCLEIC ACIDS RESEARCH, 1997, 25 (04) :743-749
[3]   The Rad5 helicase activity is dispensable for error-free DNA post-replication repair [J].
Ball, Lindsay G. ;
Xu, Xin ;
Blackwell, Susan ;
Hanna, Michelle D. ;
Lambrecht, Amanda D. ;
Xiao, Wei .
DNA REPAIR, 2014, 16 :74-83
[4]   Regulation of alternative replication bypass pathways at stalled replication forks and its effects on genome stability: a yeast model [J].
Barbour, L ;
Xiao, W .
MUTATION RESEARCH-FUNDAMENTAL AND MOLECULAR MECHANISMS OF MUTAGENESIS, 2003, 532 (1-2) :137-155
[5]   DNA damage checkpoints are involved in postreplication repair [J].
Barbour, Leslie ;
Ball, Lindsay G. ;
Zhang, Ke ;
Xiao, Wei .
GENETICS, 2006, 174 (04) :1789-1800
[6]   Ubiquitin-binding domains in Y-family polymerases regulate translesion synthesis [J].
Bienko, M ;
Green, CM ;
Crosetto, N ;
Rudolf, F ;
Zapart, G ;
Coull, B ;
Kannouche, P ;
Wider, G ;
Peter, M ;
Lehmann, AR ;
Hofmann, K ;
Dikic, I .
SCIENCE, 2005, 310 (5755) :1821-1824
[7]   Yeast Rad5 protein required for postreplication repair has a DNA helicase activity specific for replication fork regression [J].
Blastyák, Andras ;
Pintér, Lajos ;
Unk, Ildiko ;
Prakash, Louise ;
Prakash, Satya ;
Haracska, Lajos .
MOLECULAR CELL, 2007, 28 (01) :167-175
[8]   MMS2, encoding a ubiquitin-conjugating-enzyme-like protein, is a member of the yeast error-free postreplication repair pathway [J].
Broomfield, S ;
Chow, BL ;
Xiao, W .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1998, 95 (10) :5678-5683
[9]   DNA postreplication repair and mutagenesis in Saccharomyces cerevisiae [J].
Broomfield, S ;
Hryciw, T ;
Xiao, W .
MUTATION RESEARCH-DNA REPAIR, 2001, 486 (03) :167-184
[10]   UBC13, a DNA-damage-inducible gene, is a member of the error-free postreplication repair pathway in Saccharomyces cerevisiae [J].
Brusky, J ;
Zhu, Y ;
Xiao, W .
CURRENT GENETICS, 2000, 37 (03) :168-174