Millisecond-long molecular dynamics simulations of proteins on a special-purpose machine

被引：0
|
作者：
Shaw, David E. [1 ,2 ]
机构：
[1] DE Shaw Res, New York, NY USA
[2] Columbia Univ, Ctr Computat Biol & Bioinformat, New York, NY USA
来源：
ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY | 2010年 / 240卷
关键词：
D O I：
暂无
中图分类号：
O6 [化学];
学科分类号：
0703 ;
摘要：
350-COMP
引用
收藏
页数：1
相关论文
共 50 条
  • [1] Millisecond-Long Molecular Dynamics Simulations of Proteins on a Special-Purpose Machine
    Shaw, David E.
    BIOPHYSICAL JOURNAL, 2013, 104 (02) : 45A - 45A
  • [2] Millisecond-long molecular dynamics simulations of proteins on a special-purpose machine
    Shaw, David E.
    JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS, 2013, 31 : 108 - 108
  • [3] Millisecond-long molecular dynamics simulations of proteins on a special-purpose machine
    Shaw, David E.
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2012, 243
  • [4] Molecular dynamics machine: Special-purpose computer for molecular dynamics simulations
    Narumi, E
    Susukita, R
    Ebisuzaki, T
    McNiven, G
    Elmegreen, B
    MOLECULAR SIMULATION, 1999, 21 (5-6) : 401 - 415
  • [5] Extending the generality of molecular dynamics simulations on a special-purpose machine
    Scarpazza, Daniele P.
    Ierardi, Douglas J.
    Lerer, Adam K.
    Mackenzie, Kenneth M.
    Pan, Albert C.
    Bank, Joseph A.
    Chow, Edmond
    Dror, Ron O.
    Grossman, J. P.
    Killebrew, Daniel
    Moraes, Mark A.
    Predescu, Cristian
    Salmon, John K.
    Shaw, David E.
    IEEE 27TH INTERNATIONAL PARALLEL AND DISTRIBUTED PROCESSING SYMPOSIUM (IPDPS 2013), 2013, : 933 - 945
  • [6] A special-purpose computer for molecular dynamics simulations: MDM
    Narumi, T
    ASTROPHYSICAL SUPERCOMPUTING USING PARTICLE SIMULATIONS, 2003, (208): : 349 - 358
  • [7] Anton, a special-purpose machine for molecular dynamics simulation
    Shaw, David E.
    Deneroff, Martin M.
    Dror, Ron O.
    Kuskin, Jeffrey S.
    Larson, Richard H.
    Salmon, John K.
    Young, Cliff
    Batson, Brannon
    Bowers, Kevin J.
    Chao, Jack C.
    Eastwood, Michael P.
    Gagliardo, Joseph
    Grossman, J. P.
    Ho, C. Richard
    Ierardi, Douglas J.
    Kolossvary, Istvan
    Klepeis, John L.
    Layman, Timothy
    Mcleavey, Christine
    Moraes, Mark A.
    Mueller, Rolf
    Priest, Edward C.
    Shan, Yibing
    Spengler, Jochen
    Theobald, Michael
    Towles, Brian
    Wang, Stanley C.
    COMMUNICATIONS OF THE ACM, 2008, 51 (07) : 91 - 97
  • [8] Anton, a Special-Purpose Machine for Molecular Dynamics Simulation
    Shaw, David E.
    Deneroff, Martin M.
    Dror, Ron O.
    Kuskin, Jeffrey S.
    Larson, Richard H.
    Salmon, John K.
    Young, Cliff
    Batson, Brannon
    Bowers, Kevin J.
    Chao, Jack C.
    Eastwood, Michael P.
    Gagliardo, Joseph
    Grossman, J. P.
    Ho, C. Richard
    Ierardi, Douglas J.
    Kolossvary, Istvan
    Klepeis, John L.
    Layman, Timothy
    McLeavey, Christine
    Moraes, Mark A.
    Mueller, Rolf
    Priest, Edward C.
    Shan, Yibing
    Spengler, Jochen
    Theobald, Michael
    Towles, Brian
    Wang, Stanley C.
    ISCA'07: 34TH ANNUAL INTERNATIONAL SYMPOSIUM ON COMPUTER ARCHITECTURE, CONFERENCE PROCEEDINGS, 2007, : 1 - 12
  • [9] Using Special-Purpose Hardware to Achieve a Hundred-Fold Speedup in Molecular Dynamics Simulations of Proteins
    Shaw, David
    2010 IEEE INTERNATIONAL SYMPOSIUM ON PERFORMANCE ANALYSIS OF SYSTEMS AND SOFTWARE (ISPASS 2010), 2010, : 121 - 121
  • [10] MDM: A special-purpose computer for molecular dynamics
    Kawai, A
    Ebisuzaki, T
    6TH WORLD MULTICONFERENCE ON SYSTEMICS, CYBERNETICS AND INFORMATICS, VOL XVI, PROCEEDINGS: COMPUTER SCIENCE III, 2002, : 494 - 499
12345