Molecular structure in biomolecular condensates

被引:88
作者
Peran, Ivan [1 ]
Mittag, Tanja [1 ]
机构
[1] St Jude Childrens Res Hosp, Dept Struct Biol, 332 N Lauderdale St, Memphis, TN 38105 USA
关键词
ATOMIC-RESOLUTION STRUCTURE; CELL-FREE FORMATION; PHASE-SEPARATION; LIQUID DROPLETS; RNA; PROTEIN; GRANULES; DOMAINS; BINDING; TRANSITION;
D O I
10.1016/j.sbi.2019.09.007
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Evidence accumulated over the past decade provides support for liquid-liquid phase separation as the mechanism underlying the formation of biomolecular condensates, which include not only 'membraneless' organelles such as nucleoli and RNA granules, but additional assemblies involved in transcription, translation and signaling. Understanding the molecular mechanisms of condensate function requires knowledge of the structures of their constituents. Current knowledge suggests that structures formed via multivalent domain-motif interactions remain largely unchanged within condensates. Two different viewpoints exist regarding structures of disordered low-complexity domains within condensates; one argues that low-complexity domains remain largely disordered in condensates and their multivalency is encoded in short motifs called 'stickers', while the other argues that the sequences form cross-beta structures resembling amyloid fibrils. We review these viewpoints and highlight outstanding questions that will inform structure-function relationships for biomolecular condensates.
引用
收藏
页码:17 / 26
页数:10
相关论文
共 77 条
  • [1] Are aberrant phase transitions a driver of cellular aging?
    Alberti, Simon
    Hyman, Anthony A.
    [J]. BIOESSAYS, 2016, 38 (10) : 959 - 968
  • [2] Biomolecular condensates: organizers of cellular biochemistry
    Banani, Salman F.
    Lee, Hyun O.
    Hyman, Anthony A.
    Rosen, Michael K.
    [J]. NATURE REVIEWS MOLECULAR CELL BIOLOGY, 2017, 18 (05) : 285 - 298
  • [3] Physical Chemistry of Cellular Liquid-Phase Separation
    Bentley, Emily P.
    Frey, Benjamin B.
    Deniz, Ashok A.
    [J]. CHEMISTRY-A EUROPEAN JOURNAL, 2019, 25 (22) : 5600 - 5610
  • [4] Phasing in on the cell cycle
    Boeynaems, Steven
    Tompa, Peter
    Van den Bosch, Ludo
    [J]. CELL DIVISION, 2018, 13
  • [5] Transcription Factors Activate Genes through the Phase-Separation Capacity of Their Activation Domains
    Boija, Ann
    Klein, Isaac A.
    Sabari, Benjamin R.
    Dall'Agnese, Alessandra
    Coffey, Eliot L.
    Zamudio, Alicia V.
    Li, Charles H.
    Shrinivas, Krishna
    Manteiga, John C.
    Hannett, Nancy M.
    Abraham, Brian J.
    Afeyan, Lena K.
    Guo, Yang E.
    Rimel, Jenna K.
    Fant, Charli B.
    Schuijers, Jurian
    Lee, Tong Ihn
    Taatjes, Dylan J.
    Young, Richard A.
    [J]. CELL, 2018, 175 (07) : 1842 - +
  • [6] Amyloid-like Self-Assembly of a Cellular Compartment
    Boke, Elvan
    Ruer, Martine
    Wuehr, Martin
    Coughlin, Margaret
    Lemaitre, Regis
    Gygi, Steven P.
    Alberti, Simon
    Drechsel, David
    Hyman, Anthony A.
    Mitchison, Timothy J.
    [J]. CELL, 2016, 166 (03) : 637 - 650
  • [7] Cancer Mutations of the Tumor Suppressor SPOP Disrupt the Formation of Active, Phase-Separated Compartments
    Bouchard, Jill J.
    Otero, Joel H.
    Scott, Daniel C.
    Szulc, Elzbieta
    Martin, Erik W.
    Sabri, Nafiseh
    Granata, Daniele
    Marzahn, Melissa R.
    Lindorff-Larsen, Kresten
    Salvatella, Xavier
    Schulman, Brenda A.
    Mittag, Tanja
    [J]. MOLECULAR CELL, 2018, 72 (01) : 19 - +
  • [8] Structural and hydrodynamic properties of an intrinsically disordered region of a germ cell-specific protein on phase separation
    Brady, Jacob P.
    Farber, Patrick J.
    Sekhar, Ashok
    Lin, Yi-Hsuan
    Huang, Rui
    Bah, Alaji
    Nott, Timothy J.
    Chan, Hue Sun
    Baldwin, Andrew J.
    Forman-Kay, Julie D.
    Kay, Lewis E.
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2017, 114 (39) : E8194 - E8203
  • [9] Brangwynne CP, 2015, NAT PHYS, V11, P899, DOI [10.1038/nphys3532, 10.1038/NPHYS3532]
  • [10] Active liquid-like behavior of nucleoli determines their size and shape in Xenopus laevis oocytes
    Brangwynne, Clifford P.
    Mitchison, Timothy J.
    Hyman, Anthony A.
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2011, 108 (11) : 4334 - 4339