Mapping the Anopheles gambiae Odorant Binding Protein 1 (AgamOBP1) using modeling techniques, site directed mutagenesis, circular dichroism and ligand binding assays

被引:15
作者
Rusconi, B. [1 ]
Maranhao, A. C. [1 ]
Fuhrer, J. P. [1 ]
Krotee, P. [1 ]
Choi, S. H. [2 ]
Grun, F. [1 ]
Thireou, T. [3 ]
Dimitratos, S. D. [2 ]
Woods, D. F. [2 ]
Marinotti, O. [1 ]
Walter, M. F. [1 ]
Eliopoulos, E. [3 ]
机构
[1] Univ Calif Irvine, Ctr Dev Biol, Irvine, CA 92697 USA
[2] Inscent Inc, Irvine, CA 92614 USA
[3] Agr Univ Athens, Dept Agr Biotechnol, Athens 11855, Greece
来源
BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS | 2012年 / 1824卷 / 08期
基金
美国国家卫生研究院;
关键词
Odorant Binding Protein; Anopheles gambiae; Circular dichroism spectroscopy; Fluorescence spectroscopy; Site directed mutagenesis; 3D modeling; SECONDARY STRUCTURE; TOPOHYDROPHOBIC POSITIONS; CRYSTAL-STRUCTURE; MOSQUITO; IDENTIFICATION; SPECTROSCOPY; DATABASE; INSECT; FAMILY; GENES;
D O I
10.1016/j.bbapap.2012.04.011
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The major malaria vector in Sub-Saharan Africa is the Anopheles gambiae mosquito. This species is a key target of malaria control measures. Mosquitoes find humans primarily through olfaction, yet the molecular mechanisms associated with host-seeking behavior remain largely unknown. To further understand the functionality of A. gambiae odorant binding protein 1 (AgamOBP1), we combined in silico protein structure modeling and site-directed mutagenesis to generate 16 AgamOBP1 protein analogues containing single point mutations of interest. Circular dichroism (CD) and ligand-binding assays provided data necessary to probe the effects of the point mutations on ligand binding and the overall structure of AgamOBP1. Far-UV CD spectra of mutated AgamOBP1 variants displayed both substantial decreases to ordered alpha-helix structure ( up to22%) and increases to disordered alpha-helix structure(up to 15%) with only minimal changes in random coil (unordered) structure. In mutations Y54A, Y122A and W114Q aromatic side chain removal from the binding site significantly reduced N-phenyl-1-naphthylamine binding. Several non-aromatic mutations (L15T, L19T, L58T, L58Y, M84Q, M84K, H111A, Y122A and L124T) elicited changes to protein conformation with subsequent effects on ligand binding. This study provides empirical evidence for the in silico predicted functions of specific amino acids in AgamOBP1 folding and ligand binding characteristics. (C) 2012 Elsevier B.V. All rights reserved.
引用
收藏
页码:947 / 953
页数:7
相关论文
共 38 条
[1]   Data growth and its impact on the SCOP database: new developments [J].
Andreeva, Antonina ;
Howorth, Dave ;
Chandonia, John-Marc ;
Brenner, Steven E. ;
Hubbard, Tim J. P. ;
Chothia, Cyrus ;
Murzin, Alexey G. .
NUCLEIC ACIDS RESEARCH, 2008, 36 :D419-D425
[2]   Closed loops of nearly standard size: common basic element of protein structure [J].
Berezovsky, IN ;
Grosberg, AY ;
Trifonov, EN .
FEBS LETTERS, 2000, 466 (2-3) :283-286
[3]   Protein folding: Looping from hydrophobic nuclei [J].
Berezovsky, IN ;
Kirzhner, VM ;
Kirzhner, A ;
Trifonov, EN .
PROTEINS-STRUCTURE FUNCTION AND GENETICS, 2001, 45 (04) :346-350
[4]   Novel semi-automated methodology for developing highly predictive QSAR models: application for development of QSAR models for insect repellent amides [J].
Bhonsle, Jayendra B. ;
Bhattacharjee, Apurba K. ;
Gupta, Raj K. .
JOURNAL OF MOLECULAR MODELING, 2007, 13 (01) :179-208
[5]   Microarray-based survey of a subset of putative olfactory genes in the mosquito Anopheles gambiae [J].
Biessmann, H ;
Nguyen, QK ;
Le, D ;
Walter, MF .
INSECT MOLECULAR BIOLOGY, 2005, 14 (06) :575-589
[6]   The Anopheles gambiae Odorant Binding Protein 1 (AgamOBP1) Mediates Indole Recognition in the Antennae of Female Mosquitoes [J].
Biessmann, Harald ;
Andronopoulou, Evi ;
Biessmann, Max R. ;
Douris, Vassilis ;
Dimitratos, Spiros D. ;
Eliopoulos, Elias ;
Guerin, Patrick M. ;
Iatrou, Kostas ;
Justice, Robin W. ;
Kroeber, Thomas ;
Marinotti, Osvaldo ;
Tsitoura, Panagiota ;
Woods, Daniel F. ;
Walter, Marika F. .
PLOS ONE, 2010, 5 (03)
[7]   DETERMINATION OF PROTEIN SECONDARY STRUCTURE IN SOLUTION BY VACUUM ULTRAVIOLET CIRCULAR-DICHROISM [J].
BRAHMS, S ;
BRAHMS, J .
JOURNAL OF MOLECULAR BIOLOGY, 1980, 138 (02) :149-178
[8]   The role of beta-sheet interactions in domain stability, folding, and target recognition reactions of calmodulin [J].
Browne, JP ;
Strom, M ;
Martin, SR ;
Bayley, PM .
BIOCHEMISTRY, 1997, 36 (31) :9550-9561
[9]  
Delano W.L., 2004, PYMOL MOL GRAPHICS S
[10]  
Fasman GeraldD., 1996, CIRCULAR DICHROISM C, P381