Polyphasic study of Chryseobacterium strains isolated from diseased aquatic animals

被引:122
作者
Bernardet, JF [1 ]
Vancanneyt, M
Matte-Tailliez, O
Grisez, L
Tailliez, P
Bizet, C
Nowakowski, M
Kerouault, B
Swings, J
机构
[1] INRA, Unite Virol & Immunol Mol, Jouy En Josas, France
[2] Univ Ghent, BBCM, LMG Bacteria Collect, Microbiol Lab, B-9000 Ghent, Belgium
[3] Catholic Univ Louvain, Inst Zool, Lab Ecol & Aquaculture, B-3000 Louvain, Belgium
[4] Univ Montpellier 2, INRA, Unite Ecol Microbienne Insectes & Interact Hote, Montpellier, France
[5] Inst Pasteur, Dept Struct & Dynam Genomes, Collect Inst Pasteur, Paris, France
关键词
Chryseobacterium; Elizabethkingia; fish disease; frog disease; polyphasic taxonomy; phenotypic characteristics; randomly amplified polymorphic DNA; whole-cell protein profiles; SDS-PAGE; fatty acid analysis; 16S rRNA gene sequence;
D O I
10.1016/j.syapm.2005.03.016
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Members of most Chryseottacterium species occur in aquatic environments or food products, while strains of some other species are pathogenic to humans and animals. A collection of 52 Chryseobacterium sp. strains isolated from diseased fish, one frog isolate and 22 reference strains were included in a polyphasic taxonomy study. Fourteen clusters of strains were delineated following the comparison of whole-cell protein profiles. Most of these clusters were confirmed when the phenotypic and RAPD profiles and the 16S rRNA gene sequences were compared. Fatty acid composition helped differentiate the Chryseobacterium strains from members of related genera. None of the fish isolates could be allocated to the two species previously reported from fish but two isolates belonged to C. joostei, while the frog isolate was identified as Elizabethkingia meningoseptica, a human pathogen previously included in the genus Chryseobacterium. Three clusters grouping from 3 to 13 isolates will probably constitute the core of new Chryseobacterium species but all other isolates occupied separate or uncertain positions in the genus. This study further demonstrated the overall high similarity displayed by most Chryseottacterium strains whatever the technique used and the resulting difficulty in delineating new species in the genus. Members of this bacterial group should be considered potential emergent pathogens in various fish and frog species, farming conditions and geographical areas. (c) 2005 Elsevier GmbH. All rights reserved.
引用
收藏
页码:640 / 660
页数:21
相关论文
共 46 条
  • [41] NEW PERSPECTIVES IN THE CLASSIFICATION OF THE FLAVOBACTERIA - DESCRIPTION OF CHRYSEOBACTERIUM GEN-NOV, BERGEYELLA GEN-NOV, AND EMPEDOBACTER NOM REV
    VANDAMME, P
    BERNARDET, JF
    SEGERS, P
    KERSTERS, K
    HOLMES, B
    [J]. INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1994, 44 (04): : 827 - 831
  • [42] Polyphasic taxonomy, a consensus approach to bacterial systematics
    Vandamme, P
    Pot, B
    Gillis, M
    DeVos, P
    Kersters, K
    Swings, J
    [J]. MICROBIOLOGICAL REVIEWS, 1996, 60 (02) : 407 - +
  • [43] West PA., 1984, VIBRIOS ENV, P285
  • [44] A novel protein-deamidating enzyme from Chryseobacterium proteolyticum sp nov., a newly isolated bacterium from soil
    Yamaguchi, S
    Yokoe, M
    [J]. APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2000, 66 (08) : 3337 - 3343
  • [45] Sejongia antarctica gen. nov., sp nov and Sejongia jeonii sp nov., isolated from the Antarctic
    Yi, H
    Yoon, HI
    Chun, J
    [J]. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2005, 55 : 409 - 416
  • [46] Chryseobacterium formosense sp nov., isolated from the rhizosphere of Lactuca sativa L. (garden lettuce)
    Young, CC
    Kämpfer, PK
    Shen, FT
    Lai, WA
    Arun, AB
    [J]. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2005, 55 : 423 - 426