The genomics of lactic acid bacteria

被引：126

作者：

Pfeiler, Erika A. ^{[1
,3
]}

Klaenhammer, Todd R. ^{[1
,2
,3
]}

机构：

[1] N Carolina State Univ, Genom Sci Grad Program, Raleigh, NC 27695 USA

[2] N Carolina State Univ, Dept Food Sci, Raleigh, NC 27695 USA

[3] N Carolina State Univ, SE Dairy Foods Res Ctr, Raleigh, NC 27695 USA

来源：

TRENDS IN MICROBIOLOGY | 2007年 / 15卷 / 12期

关键词：

LACTOBACILLUS-ACIDOPHILUS NCFM; 2-COMPONENT REGULATORY SYSTEM; LACTOCOCCUS-LACTIS; STREPTOCOCCUS-THERMOPHILUS; MICROARRAY ANALYSIS; FUNCTIONAL-ANALYSIS; JOHNSONII NCC-533; SALIVARIUS UCC118; FLAVOR FORMATION; OENOCOCCUS-OENI;

D O I：

10.1016/j.tim.2007.09.010

中图分类号：

Q5 [生物化学]; Q7 [分子生物学];

学科分类号：

071010 ; 081704 ;

摘要：

The lactic acid bacteria (LAB) are one of the most industrially important groups of bacteria. These organisms are used in a variety of ways, including food production, health improvement and production of macromolecules, enzymes and metabolites. The genome sequencing of 20 LAB provides an expanded view of their genetic and metabolic capacities and enables researchers to perform functional and comparative genomic studies. This review highlights some of the findings from these analyses in the context of the numerous roles the LAB play.

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页码：546 / 553

页数：8

相关论文

共 62 条

[1] Complete genome sequence of the probiotic lactic acid bacterium Lactobacillus acidophilus NCFM [J].

Altermann, E ;

Russell, WM ;

Azcarate-Peril, MA ;

Barrangou, R ;

Buck, BL ;

McAuliffe, O ;

Souther, N ;

Dobson, A ;

Duong, T ;

Callanan, M ;

Lick, S ;

Hamrick, A ;

Cano, R ;

Klaenhammer, TR .

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2005, 102 (11) :3906-3912

[2] Microarray analysis of a two-component regulatory system involved in acid resistance and proteolytic activity in Lactobacillus acidophilus [J].

Azcarate-Peril, MA ;

McAuliffe, O ;

Altermann, E ;

Lick, S ;

Russell, WM ;

Klaenhammer, TR .

APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2005, 71 (10) :5794-5804

[3] Global analysis of carbohydrate utilization by Lactobacillus acidophilus using cDNA microarrays [J].

Barrangou, R ;

Azcarate-Peril, MA ;

Duong, T ;

Conners, SB ;

Kelly, RM ;

Klaenhammer, TR .

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2006, 103 (10) :3816-3821

[4] Functional and comparative genomic analyses of an operon involved in fructooligosaccharide utilization by Lactobacillus acidophilus [J].

Barrangou, R ;

Altermann, E ;

Hutkins, R ;

Cano, R ;

Klaenhammer, TR .

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2003, 100 (15) :8957-8962

[5] CRISPR provides acquired resistance against viruses in prokaryotes [J].

Barrangou, Rodolphe ;

Fremaux, Christophe ;

Deveau, Helene ;

Richards, Melissa ;

Boyaval, Patrick ;

Moineau, Sylvain ;

Romero, Dennis A. ;

Horvath, Philippe .

SCIENCE, 2007, 315 (5819) :1709-1712

[6] The interaction between bacteria and bile [J].

Begley, M ;

Gahan, CGM ;

Hill, C .

FEMS MICROBIOLOGY REVIEWS, 2005, 29 (04) :625-651

[7] Real-time PCR for characterizing the stress response of Oenococcus oeni in a wine-like medium [J].

Beltramo, C ;

Desroche, N ;

Tourdot-Maréchal, R ;

Grandvalet, C ;

Guzzo, J .

RESEARCH IN MICROBIOLOGY, 2006, 157 (03) :267-274

[8] Similarity and differences in the Lactobacillus acidophilus group identified by polyphasic analysis and comparative genomics [J].

Berger, Bernard ;

Pridmore, R. David ;

Barretto, Caroline ;

Delmas-Julien, Francoise ;

Schreiber, Kerstin ;

Arigoni, Fabrizio ;

Bruessow, Harald .

JOURNAL OF BACTERIOLOGY, 2007, 189 (04) :1311-1321

[9] Complete sequence and comparative genome analysis of the dairy bacterium Streptococcus thermophilus [J].

Bolotin, A ;

Quinquis, B ;

Renault, P ;

Sorokin, A ;

Ehrlich, SD ;

Kulakauskas, S ;

Lapidus, A ;

Goltsman, E ;

Mazur, M ;

Pusch, GD ;

Fonstein, M ;

Overbeek, R ;

Kyprides, N ;

Purnelle, B ;

Prozzi, D ;

Ngui, K ;

Masuy, D ;

Hancy, F ;

Burteau, S ;

Boutry, M ;

Delcour, J ;

Goffeau, A ;

Hols, P .

NATURE BIOTECHNOLOGY, 2004, 22 (12) :1554-1558

[10] The complete genome sequence of the lactic acid bacterium Lactococcus lactis ssp lactis IL1403 [J].

Bolotin, A ;

Wincker, P ;

Mauger, S ;

Jaillon, O ;

Malarme, K ;

Weissenbach, J ;

Ehrlich, SD ;

Sorokin, A .

GENOME RESEARCH, 2001, 11 (05) :731-753

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