Reconstructing weighted networks from dynamics

被引：46

作者：

Ching, Emily S. C. ^{[1
]}

Lai, Pik-Yin ^{[2
,3
,4
]}

Leung, C. Y. ^{[1
]}

机构：

[1] Chinese Univ Hong Kong, Dept Phys, Shatin, Hong Kong, Peoples R China

[2] Natl Cent Univ, Dept Phys, Chungli 320, Taiwan

[3] Natl Cent Univ, Ctr Complex Syst, Chungli 320, Taiwan

[4] Natl Ctr Theoret Sci, Div Phys, Hsinchu 300, Taiwan

来源：

PHYSICAL REVIEW E | 2015年 / 91卷 / 03期

关键词：

TOPOLOGY; STATES;

D O I：

10.1103/PhysRevE.91.030801

中图分类号：

O35 [流体力学]; O53 [等离子体物理学];

学科分类号：

070204 ; 080103 ; 080704 ;

摘要：

We present a method that reconstructs both the links and their relative coupling strength of bidirectional weighted networks. Our method requires only measurements of node dynamics as input. Using several examples, we demonstrate that our method can give accurate results for weighted random and weighted scale-free networks with both linear and nonlinear dynamics.

引用

页数：5

共 33 条

[1] Statistical mechanics of complex networks
Albert, R
Barabási, AL
[J]. REVIEWS OF MODERN PHYSICS, 2002, 74 (01) : 47 - 97
[2] Emergence of scaling in random networks
Barabási, AL
Albert, R
[J]. SCIENCE, 1999, 286 (5439) : 509 - 512
[3] Weighted evolving networks:: Coupling topology and weight dynamics -: art. no. 228701
Barrat, A
Barthélemy, M
Vespignani, A
[J]. PHYSICAL REVIEW LETTERS, 2004, 92 (22) : 228701 - 1
[4] Identification of functional information subgraphs in complex networks
Bettencourt, Luis M. A.
Gintautas, Vadas
Ham, Michael I.
[J]. PHYSICAL REVIEW LETTERS, 2008, 100 (23)
[5] Complex brain networks: graph theoretical analysis of structural and functional systems
Bullmore, Edward T.
Sporns, Olaf
[J]. NATURE REVIEWS NEUROSCIENCE, 2009, 10 (03) : 186 - 198
[6] Extracting connectivity from dynamics of networks with uniform bidirectional coupling
Ching, Emily S. C.
Lai, Pik-Yin
Leung, C. Y.
[J]. PHYSICAL REVIEW E, 2013, 88 (04):
[7] Advantages and limitations of current network inference methods
De Smet, Riet
Marchal, Kathleen
[J]. NATURE REVIEWS MICROBIOLOGY, 2010, 8 (10) : 717 - 729
[8] Emmert-Streib Frank, 2012, Frontiers in Genetics, V3, P8, DOI [10.3389/fgene.2012.00313, 10.3389/fgene.2012.00008]
[9] IMPULSES AND PHYSIOLOGICAL STATES IN THEORETICAL MODELS OF NERVE MEMBRANE
FITZHUGH, R
[J]. BIOPHYSICAL JOURNAL, 1961, 1 (06) : 445 - &
[10] Using Bayesian networks to analyze expression data
Friedman, N
Linial, M
Nachman, I
Pe'er, D
[J]. JOURNAL OF COMPUTATIONAL BIOLOGY, 2000, 7 (3-4) : 601 - 620

← 1 2 3 4 →