Identification of New CRF51_01B in Singapore Using Full Genome Analysis of Three HIV Type 1 Isolates

被引:0
作者
Ng, Oon Tek [1 ,2 ]
Eyzaguirre, Lindsay M. [3 ]
Carr, Jean K.
Chew, Kuan Kiat [2 ]
Lin, Li [2 ]
Chua, Arlene [2 ]
Leo, Yee Sin [2 ]
Redd, Andrew D. [4 ]
Quinn, Thomas C. [1 ,4 ]
Laeyendecker, Oliver [1 ,4 ]
机构
[1] Johns Hopkins Med Inst, Johns Hopkins Sch Med, Baltimore, MD 21205 USA
[2] Tan Tock Seng Hosp, Dept Infect Dis, Singapore, Singapore
[3] Univ Maryland, Sch Med, Inst Human Virol, Baltimore, MD 21201 USA
[4] NIAID, Immunoregulat Lab, Div Intramural Res, NIH, Baltimore, MD USA
关键词
CIRCULATING RECOMBINANT FORM; THAILAND; CRF15-01B; CRF33-01B; SEQUENCE; MALAYSIA;
D O I
10.1089/aid.2011.0177
中图分类号
R392 [医学免疫学]; Q939.91 [免疫学];
学科分类号
100102 ;
摘要
A recent HIV-1 molecular epidemiology survey in Singapore identified a novel CRF01_AE/B recombinant form, which accounted for 13 (11.9%) of 109 patient samples. Peripheral blood mononuclear cell DNA from three of these 13 patients was used to generate near full-length sequences to characterize the novel CRF01_AE/B recombinant form. The three isolates had a recombinant structure composed of CRF01_AE and subtype B, and shared identical breakpoints. As the three patients were not epidemiologically linked, this recombinant form has been designated CRF51_01B. Identification of the novel recombinant forms indicates ongoing active HIV-1 transmission in Singapore.
引用
收藏
页码:527 / 530
页数:4
相关论文
共 18 条
  • [1] Molecular Epidemiology of HIV Type 1 in Singapore and Identification of Novel CRF01_AE/B Recombinant Forms
    Oon Tek Ng
    Munshaw, Supriya
    Lamers, Susanna L.
    Chew, Kuan Kiat
    Lin, Li
    Redd, Andrew D.
    Manucci, Jordyn
    Quinn, Thomas C.
    Ray, Stuart C.
    Chua, Arlene
    Leo, Yee Sin
    Laeyendecker, Oliver
    AIDS RESEARCH AND HUMAN RETROVIRUSES, 2011, 27 (10) : 1135 - 1137
  • [2] The Identification of a Novel HIV-1 CRF01_AE/B Recombinant Using the Near Full Length Genome in Jiangsu Province, China
    Guo, Hongxiong
    Hu, Haiyang
    Zhou, Ying
    Huan, Xiping
    Qiu, Tao
    Fu, Gengfeng
    Lu, Jing
    Wang, Xiaoliang
    AIDS RESEARCH AND HUMAN RETROVIRUSES, 2014, 30 (12) : 1239 - 1242
  • [3] Identification of a Novel HIV Type 1 Circulating Recombinant Form (CRF52_01B) in Southeast Asia
    Liu, Yongjian
    Li, Lin
    Bao, Zuoyi
    Li, Hanping
    Zhuang, Daomin
    Liu, Siyang
    Wang, Xiaolin
    Li, Tianyi
    Jia, Lei
    Yang, Shaomin
    Li, Jingyun
    AIDS RESEARCH AND HUMAN RETROVIRUSES, 2012, 28 (10) : 1357 - 1361
  • [4] Genome Sequences of a Novel HIV-1 CRF53_01B Identified in Malaysia
    Chow, Wei Zhen
    Al-Darraji, Haider
    Lee, Yeat Mei
    Takebe, Yutaka
    Kamarulzaman, Adeeba
    Tee, Kok Keng
    JOURNAL OF VIROLOGY, 2012, 86 (20) : 11398 - 11399
  • [5] Near Full-Length Sequence Analysis of Two New HIV Type 1 Unique (CRF01_AE/B) Recombinant Forms Among Men Who Have Sex with Men in China
    Wang, Wanhai
    Meng, Zhefeng
    Zhou, Mingzhe
    Guo, Chaodong
    Zhang, Fengmin
    Xu, Jianqing
    Zhang, Xiaoyan
    AIDS RESEARCH AND HUMAN RETROVIRUSES, 2012, 28 (04) : 411 - 417
  • [6] The Identification of a Novel HIV-1 CRF01_AE/B Recombinant Based on Near Full-Length Genomic Analysis in Yunnan Province, China
    Li, Jianjian
    Li, Lin
    Yang, Shaomin
    Li, Jingyun
    Zhang, Mi
    Yang, Cuixian
    Liu, Jiafa
    Li, Huiqin
    AIDS RESEARCH AND HUMAN RETROVIRUSES, 2016, 32 (05) : 467 - 470
  • [7] Identification of the Near Full-length Genome of a Novel HIV-1 CRF01_AE/CRF07_BC Recombinant with a Complex Genomic Structure Isolated in Hebei Province, China
    Fan, Weiguang
    Jia, Jianru
    Shi, Haoxi
    Su, Miaomiao
    Meng, Juan
    An, Weina
    CURRENT HIV RESEARCH, 2023, 21 (04) : 268 - 276
  • [8] Near Full-Length Genomic Characterization of a Novel HIV Type 1 Recombinant Form (CRF01_AE/B) Identified from Anhui, China
    Li, Kang
    Ou, Weidong
    Feng, Yi
    Sun, Jia
    Ge, Zhangwen
    Xing, Hui
    Liang, Hao
    Shao, Yiming
    AIDS RESEARCH AND HUMAN RETROVIRUSES, 2018, 34 (12) : 1100 - 1105
  • [9] Near Full-Length Genome Characterization of an HIV-1 CRF01_AE Strain in Jiangsu, China: Evidence of Two Independent Introductions from Fujian
    Guo, Dongmei
    Ding, Na
    Xu, Yanping
    Guo, Hongxiong
    Wei, Ji-Fu
    Wang, Jian-Hua
    He, Guangli
    Yang, Rongge
    Zhang, Chiyu
    AIDS RESEARCH AND HUMAN RETROVIRUSES, 2009, 25 (06) : 619 - 623
  • [10] Tracing the epidemic history of HIV-1 CRF01_ AE clusters using near-complete genome sequences
    Li, Xingguang
    Liu, Haizhou
    Liu, Lu
    Feng, Yi
    Kalish, Marcia L.
    Ho, Simon Y. W.
    Shao, Yiming
    SCIENTIFIC REPORTS, 2017, 7